Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Lsm3P62311 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.47□□□□□ -0.57
Lsm3P62311 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Lsm3P62311 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.47□□□□□ -0.57
Lsm3P62311 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Lsm3P62311 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
Lsm3P62311 Gm9630-201ENSMUST00000178304 885 ntBASIC11.47□□□□□ -0.57
Lsm3P62311 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
Lsm3P62311 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.47□□□□□ -0.57
Lsm3P62311 Gm45612-201ENSMUST00000211320 160 ntBASIC11.47□□□□□ -0.57
Lsm3P62311 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.47□□□□□ -0.57
Lsm3P62311 Psmb5-202ENSMUST00000227257 622 ntBASIC11.47□□□□□ -0.57
Lsm3P62311 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Lsm3P62311 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Lsm3P62311 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Lsm3P62311 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm3P62311 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm3P62311 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm3P62311 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm3P62311 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.46□□□□□ -0.57
Lsm3P62311 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm3P62311 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm3P62311 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm3P62311 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm3P62311 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Lsm3P62311 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm3P62311 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm3P62311 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm3P62311 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm3P62311 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm3P62311 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Lsm3P62311 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lsm3P62311 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm3P62311 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lsm3P62311 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm3P62311 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm3P62311 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm3P62311 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm3P62311 Gm9727-201ENSMUST00000161387 555 ntBASIC11.46□□□□□ -0.57
Lsm3P62311 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.46□□□□□ -0.57
Lsm3P62311 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lsm3P62311 Gm9229-201ENSMUST00000222777 126 ntBASIC11.46□□□□□ -0.57
Lsm3P62311 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Lsm3P62311 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm3P62311 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lsm3P62311 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.46□□□□□ -0.57
Lsm3P62311 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm3P62311 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.46□□□□□ -0.58
Lsm3P62311 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm3P62311 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Lsm3P62311 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm3P62311 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.58
Lsm3P62311 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm3P62311 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Lsm3P62311 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Lsm3P62311 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm3P62311 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm3P62311 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm3P62311 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm3P62311 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm3P62311 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm3P62311 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm3P62311 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Lsm3P62311 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm3P62311 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm3P62311 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm3P62311 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lsm3P62311 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.45□□□□□ -0.58
Lsm3P62311 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Lsm3P62311 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.45□□□□□ -0.58
Lsm3P62311 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lsm3P62311 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lsm3P62311 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.45□□□□□ -0.58
Lsm3P62311 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms