Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sf3b6P59708 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sf3b6P59708 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Sf3b6P59708 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.22□□□□□ -0.61
Sf3b6P59708 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sf3b6P59708 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Sf3b6P59708 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.22□□□□□ -0.61
Sf3b6P59708 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Sf3b6P59708 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.22□□□□□ -0.61
Sf3b6P59708 Gm38223-201ENSMUST00000194484 695 ntBASIC11.22□□□□□ -0.61
Sf3b6P59708 Gm37917-201ENSMUST00000194711 392 ntBASIC11.22□□□□□ -0.61
Sf3b6P59708 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.22□□□□□ -0.61
Sf3b6P59708 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.22□□□□□ -0.61
Sf3b6P59708 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.22□□□□□ -0.61
Sf3b6P59708 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.22□□□□□ -0.61
Sf3b6P59708 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sf3b6P59708 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Sf3b6P59708 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Sf3b6P59708 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.21□□□□□ -0.61
Sf3b6P59708 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Sf3b6P59708 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.21□□□□□ -0.61
Sf3b6P59708 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Sf3b6P59708 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Sf3b6P59708 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Sf3b6P59708 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Sf3b6P59708 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.21□□□□□ -0.61
Sf3b6P59708 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.21□□□□□ -0.61
Sf3b6P59708 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sf3b6P59708 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.21□□□□□ -0.61
Sf3b6P59708 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.21□□□□□ -0.61
Sf3b6P59708 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.21□□□□□ -0.61
Sf3b6P59708 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Mir339-201ENSMUST00000083659 96 ntBASIC11.21□□□□□ -0.61
Sf3b6P59708 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.21□□□□□ -0.61
Sf3b6P59708 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sf3b6P59708 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3b6P59708 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Sf3b6P59708 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3b6P59708 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3b6P59708 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3b6P59708 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Sf3b6P59708 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3b6P59708 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3b6P59708 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sf3b6P59708 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sf3b6P59708 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms