Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Nphp4P59240 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Nphp4P59240 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nphp4P59240 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nphp4P59240 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC16.94■□□□□ 0.3
Nphp4P59240 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC16.94■□□□□ 0.3
Nphp4P59240 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nphp4P59240 Gm22902-201ENSMUST00000158488 302 ntBASIC16.94■□□□□ 0.3
Nphp4P59240 Gm19353-201ENSMUST00000184561 445 ntBASIC16.94■□□□□ 0.3
Nphp4P59240 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Nphp4P59240 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nphp4P59240 Gm8959-201ENSMUST00000213150 571 ntBASIC16.94■□□□□ 0.3
Nphp4P59240 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nphp4P59240 AC133602.1-201ENSMUST00000227510 509 ntBASIC16.94■□□□□ 0.3
Nphp4P59240 Gm7002-201ENSMUST00000221386 2165 ntBASIC16.94■□□□□ 0.3
Nphp4P59240 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nphp4P59240 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nphp4P59240 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Nphp4P59240 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.94■□□□□ 0.3
Nphp4P59240 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nphp4P59240 Gm37131-201ENSMUST00000192502 1561 ntBASIC16.93■□□□□ 0.3
Nphp4P59240 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nphp4P59240 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nphp4P59240 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
Nphp4P59240 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Nphp4P59240 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Nphp4P59240 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nphp4P59240 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nphp4P59240 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nphp4P59240 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nphp4P59240 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nphp4P59240 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nphp4P59240 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nphp4P59240 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.93■□□□□ 0.3
Nphp4P59240 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nphp4P59240 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nphp4P59240 Gm8038-201ENSMUST00000164674 2044 ntBASIC16.93■□□□□ 0.3
Nphp4P59240 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC16.93■□□□□ 0.3
Nphp4P59240 Gm14058-201ENSMUST00000116082 735 ntBASIC16.93■□□□□ 0.3
Nphp4P59240 Gm7851-201ENSMUST00000117574 323 ntBASIC16.93■□□□□ 0.3
Nphp4P59240 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC16.93■□□□□ 0.3
Nphp4P59240 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC16.93■□□□□ 0.3
Nphp4P59240 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC16.93■□□□□ 0.3
Nphp4P59240 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC16.93■□□□□ 0.3
Nphp4P59240 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nphp4P59240 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nphp4P59240 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nphp4P59240 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nphp4P59240 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC16.93■□□□□ 0.3
Nphp4P59240 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nphp4P59240 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nphp4P59240 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nphp4P59240 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nphp4P59240 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Nphp4P59240 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.92■□□□□ 0.3
Nphp4P59240 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nphp4P59240 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nphp4P59240 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nphp4P59240 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.92■□□□□ 0.3
Nphp4P59240 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nphp4P59240 Gm5419-201ENSMUST00000119301 527 ntBASIC16.92■□□□□ 0.3
Nphp4P59240 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC16.92■□□□□ 0.3
Nphp4P59240 Cd63-ps-202ENSMUST00000154992 717 ntBASIC16.92■□□□□ 0.3
Nphp4P59240 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nphp4P59240 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC16.92■□□□□ 0.3
Nphp4P59240 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nphp4P59240 Gm4482-201ENSMUST00000200876 742 ntBASIC16.92■□□□□ 0.3
Nphp4P59240 AC098716.1-201ENSMUST00000213527 703 ntBASIC16.92■□□□□ 0.3
Nphp4P59240 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nphp4P59240 Gm21811-201ENSMUST00000096485 930 ntBASIC16.92■□□□□ 0.3
Nphp4P59240 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nphp4P59240 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nphp4P59240 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nphp4P59240 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Nphp4P59240 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nphp4P59240 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nphp4P59240 Gm44260-201ENSMUST00000204946 2094 ntBASIC16.92■□□□□ 0.3
Nphp4P59240 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nphp4P59240 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nphp4P59240 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Nphp4P59240 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nphp4P59240 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Nphp4P59240 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nphp4P59240 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nphp4P59240 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Nphp4P59240 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nphp4P59240 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nphp4P59240 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nphp4P59240 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.91■□□□□ 0.3
Nphp4P59240 AC159195.1-201ENSMUST00000225867 2086 ntBASIC16.91■□□□□ 0.3
Nphp4P59240 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nphp4P59240 Mir680-2-201ENSMUST00000102163 110 ntBASIC16.91■□□□□ 0.3
Nphp4P59240 Gm23251-201ENSMUST00000103773 110 ntBASIC16.91■□□□□ 0.3
Nphp4P59240 Gm11511-201ENSMUST00000118146 540 ntBASIC16.91■□□□□ 0.3
Nphp4P59240 Gm2420-201ENSMUST00000119864 2149 ntBASIC16.91■□□□□ 0.3
Nphp4P59240 Mir7677-201ENSMUST00000184226 67 ntBASIC16.91■□□□□ 0.3
Nphp4P59240 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC16.91■□□□□ 0.3
Nphp4P59240 Ighv4-2-201ENSMUST00000192975 362 ntBASIC16.91■□□□□ 0.3
Nphp4P59240 Gm43184-201ENSMUST00000197247 542 ntBASIC16.91■□□□□ 0.3
Nphp4P59240 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms