Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.2□□□□□ -0.78
Sssca1P56873 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.2□□□□□ -0.78
Sssca1P56873 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Sssca1P56873 Gm5687-201ENSMUST00000118252 640 ntBASIC10.2□□□□□ -0.78
Sssca1P56873 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.2□□□□□ -0.78
Sssca1P56873 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.2□□□□□ -0.78
Sssca1P56873 Gm12291-201ENSMUST00000121627 311 ntBASIC10.2□□□□□ -0.78
Sssca1P56873 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.2□□□□□ -0.78
Sssca1P56873 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Sssca1P56873 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.2□□□□□ -0.78
Sssca1P56873 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Sssca1P56873 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Sssca1P56873 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Sssca1P56873 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Sssca1P56873 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.2□□□□□ -0.78
Sssca1P56873 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.2□□□□□ -0.78
Sssca1P56873 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.2□□□□□ -0.78
Sssca1P56873 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.2□□□□□ -0.78
Sssca1P56873 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Gm26035-201ENSMUST00000083065 308 ntBASIC10.2□□□□□ -0.78
Sssca1P56873 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Sssca1P56873 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Sssca1P56873 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.2□□□□□ -0.78
Sssca1P56873 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.19□□□□□ -0.78
Sssca1P56873 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.19□□□□□ -0.78
Sssca1P56873 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sssca1P56873 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sssca1P56873 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sssca1P56873 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sssca1P56873 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Sssca1P56873 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sssca1P56873 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Sssca1P56873 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sssca1P56873 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.19□□□□□ -0.78
Sssca1P56873 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sssca1P56873 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.19□□□□□ -0.78
Sssca1P56873 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sssca1P56873 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sssca1P56873 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.19□□□□□ -0.78
Sssca1P56873 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.19□□□□□ -0.78
Sssca1P56873 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.19□□□□□ -0.78
Sssca1P56873 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sssca1P56873 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.19□□□□□ -0.78
Sssca1P56873 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.19□□□□□ -0.78
Sssca1P56873 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Sssca1P56873 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.19□□□□□ -0.78
Sssca1P56873 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.19□□□□□ -0.78
Sssca1P56873 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.19□□□□□ -0.78
Sssca1P56873 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.19□□□□□ -0.78
Sssca1P56873 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.19□□□□□ -0.78
Sssca1P56873 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.19□□□□□ -0.78
Sssca1P56873 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.19□□□□□ -0.78
Sssca1P56873 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sssca1P56873 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sssca1P56873 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sssca1P56873 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Sssca1P56873 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sssca1P56873 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Sssca1P56873 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.19□□□□□ -0.78
Sssca1P56873 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sssca1P56873 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sssca1P56873 Daam2-202ENSMUST00000224595 1926 ntBASIC10.19□□□□□ -0.78
Sssca1P56873 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Sssca1P56873 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sssca1P56873 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.19□□□□□ -0.78
Sssca1P56873 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.19□□□□□ -0.78
Sssca1P56873 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sssca1P56873 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.18□□□□□ -0.78
Sssca1P56873 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.18□□□□□ -0.78
Sssca1P56873 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.18□□□□□ -0.78
Sssca1P56873 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Sssca1P56873 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sssca1P56873 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms