Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Msh6P54276 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Msh6P54276 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh6P54276 Gm9022-201ENSMUST00000182482 992 ntBASIC15.92■□□□□ 0.14
Msh6P54276 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC15.92■□□□□ 0.14
Msh6P54276 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC15.92■□□□□ 0.14
Msh6P54276 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC15.92■□□□□ 0.14
Msh6P54276 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh6P54276 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Msh6P54276 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh6P54276 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh6P54276 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh6P54276 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh6P54276 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh6P54276 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Msh6P54276 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh6P54276 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh6P54276 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC15.92■□□□□ 0.14
Msh6P54276 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh6P54276 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh6P54276 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.91■□□□□ 0.14
Msh6P54276 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Msh6P54276 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh6P54276 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh6P54276 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh6P54276 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh6P54276 Gm6039-201ENSMUST00000121667 1250 ntBASIC15.91■□□□□ 0.14
Msh6P54276 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC15.91■□□□□ 0.14
Msh6P54276 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Msh6P54276 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh6P54276 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh6P54276 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh6P54276 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh6P54276 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh6P54276 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Msh6P54276 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh6P54276 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Msh6P54276 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.91■□□□□ 0.14
Msh6P54276 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh6P54276 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh6P54276 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh6P54276 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh6P54276 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.91■□□□□ 0.14
Msh6P54276 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.91■□□□□ 0.14
Msh6P54276 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Msh6P54276 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh6P54276 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh6P54276 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh6P54276 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh6P54276 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.9■□□□□ 0.14
Msh6P54276 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Msh6P54276 Gm15711-201ENSMUST00000118889 535 ntBASIC15.9■□□□□ 0.14
Msh6P54276 Gm15131-201ENSMUST00000119124 595 ntBASIC15.9■□□□□ 0.14
Msh6P54276 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh6P54276 Gm27627-201ENSMUST00000183644 150 ntBASIC15.9■□□□□ 0.14
Msh6P54276 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Msh6P54276 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC15.9■□□□□ 0.14
Msh6P54276 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
Msh6P54276 AC163667.3-201ENSMUST00000225774 222 ntBASIC15.9■□□□□ 0.14
Msh6P54276 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC15.9■□□□□ 0.14
Msh6P54276 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msh6P54276 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh6P54276 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh6P54276 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Msh6P54276 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Msh6P54276 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh6P54276 Gm9279-201ENSMUST00000223175 1606 ntBASIC15.9■□□□□ 0.14
Msh6P54276 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msh6P54276 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh6P54276 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh6P54276 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.14
Msh6P54276 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
Msh6P54276 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Msh6P54276 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.89■□□□□ 0.13
Msh6P54276 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh6P54276 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Msh6P54276 Gm6506-201ENSMUST00000119775 1136 ntBASIC15.89■□□□□ 0.13
Msh6P54276 Gm11667-201ENSMUST00000119828 486 ntBASIC15.89■□□□□ 0.13
Msh6P54276 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC15.89■□□□□ 0.13
Msh6P54276 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC15.89■□□□□ 0.13
Msh6P54276 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Msh6P54276 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Msh6P54276 Gm10752-201ENSMUST00000218348 729 ntBASIC15.89■□□□□ 0.13
Msh6P54276 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh6P54276 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh6P54276 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Msh6P54276 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Msh6P54276 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh6P54276 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Msh6P54276 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Msh6P54276 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh6P54276 AC159308.2-201ENSMUST00000213592 2325 ntBASIC15.89■□□□□ 0.13
Msh6P54276 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh6P54276 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh6P54276 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh6P54276 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh6P54276 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh6P54276 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh6P54276 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC15.89■□□□□ 0.13
Msh6P54276 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms