Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox1P53783 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Sox1P53783 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox1P53783 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Sox1P53783 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.88□□□□□ -0.35
Sox1P53783 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.88□□□□□ -0.35
Sox1P53783 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.88□□□□□ -0.35
Sox1P53783 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.88□□□□□ -0.35
Sox1P53783 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.88□□□□□ -0.35
Sox1P53783 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Gm5100-201ENSMUST00000195631 589 ntBASIC12.88□□□□□ -0.35
Sox1P53783 Gm42511-201ENSMUST00000196160 234 ntBASIC12.88□□□□□ -0.35
Sox1P53783 Ighv1-86-201ENSMUST00000200562 353 ntBASIC12.88□□□□□ -0.35
Sox1P53783 Gm43962-201ENSMUST00000203898 190 ntBASIC12.88□□□□□ -0.35
Sox1P53783 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.88□□□□□ -0.35
Sox1P53783 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.88□□□□□ -0.35
Sox1P53783 Gm2875-201ENSMUST00000211333 360 ntBASIC12.88□□□□□ -0.35
Sox1P53783 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.88□□□□□ -0.35
Sox1P53783 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.88□□□□□ -0.35
Sox1P53783 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Sox1P53783 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Sox1P53783 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Sox1P53783 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Sox1P53783 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox1P53783 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sox1P53783 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sox1P53783 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sox1P53783 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sox1P53783 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sox1P53783 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sox1P53783 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sox1P53783 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sox1P53783 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.87□□□□□ -0.35
Sox1P53783 Gm11949-201ENSMUST00000117640 372 ntBASIC12.87□□□□□ -0.35
Sox1P53783 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Sox1P53783 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.87□□□□□ -0.35
Sox1P53783 Gm26989-201ENSMUST00000182608 749 ntBASIC12.87□□□□□ -0.35
Sox1P53783 Gm3332-201ENSMUST00000189337 928 ntBASIC12.87□□□□□ -0.35
Sox1P53783 Gm9645-201ENSMUST00000197131 792 ntBASIC12.87□□□□□ -0.35
Sox1P53783 Gm44158-201ENSMUST00000203881 505 ntBASIC12.87□□□□□ -0.35
Sox1P53783 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.87□□□□□ -0.35
Sox1P53783 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Gm807-202ENSMUST00000224929 408 ntBASIC12.87□□□□□ -0.35
Sox1P53783 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.87□□□□□ -0.35
Sox1P53783 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sox1P53783 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Sox1P53783 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox1P53783 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.87□□□□□ -0.35
Sox1P53783 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox1P53783 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms