Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Gm19994-201ENSMUST00000217086 586 ntBASIC13.68□□□□□ -0.22
SqleP52019 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SqleP52019 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SqleP52019 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SqleP52019 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.68□□□□□ -0.22
SqleP52019 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SqleP52019 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SqleP52019 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SqleP52019 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SqleP52019 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.68□□□□□ -0.22
SqleP52019 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SqleP52019 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SqleP52019 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.68□□□□□ -0.22
SqleP52019 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SqleP52019 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SqleP52019 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SqleP52019 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SqleP52019 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SqleP52019 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SqleP52019 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SqleP52019 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.67□□□□□ -0.22
SqleP52019 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
SqleP52019 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SqleP52019 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SqleP52019 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.67□□□□□ -0.22
SqleP52019 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
SqleP52019 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.67□□□□□ -0.22
SqleP52019 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.67□□□□□ -0.22
SqleP52019 Gm22144-201ENSMUST00000157402 102 ntBASIC13.67□□□□□ -0.22
SqleP52019 Gm5621-201ENSMUST00000187303 640 ntBASIC13.67□□□□□ -0.22
SqleP52019 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.67□□□□□ -0.22
SqleP52019 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.67□□□□□ -0.22
SqleP52019 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SqleP52019 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
SqleP52019 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Gm8325-201ENSMUST00000099086 453 ntBASIC13.67□□□□□ -0.22
SqleP52019 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.67□□□□□ -0.22
SqleP52019 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SqleP52019 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SqleP52019 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SqleP52019 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.67□□□□□ -0.22
SqleP52019 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
SqleP52019 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SqleP52019 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 Gm1848-201ENSMUST00000120711 789 ntBASIC13.66□□□□□ -0.22
SqleP52019 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.66□□□□□ -0.22
SqleP52019 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.66□□□□□ -0.22
SqleP52019 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SqleP52019 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
SqleP52019 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SqleP52019 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SqleP52019 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.66□□□□□ -0.22
SqleP52019 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SqleP52019 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SqleP52019 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.66□□□□□ -0.22
SqleP52019 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms