Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc3P49135 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.01□□□□□ -0.01
Ercc3P49135 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15□□□□□ -0.01
Ercc3P49135 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 Gm38319-201ENSMUST00000194537 1266 ntBASIC15□□□□□ -0.01
Ercc3P49135 AC159896.2-201ENSMUST00000214753 269 ntBASIC15□□□□□ -0.01
Ercc3P49135 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15□□□□□ -0.01
Ercc3P49135 AC154319.1-201ENSMUST00000216330 312 ntBASIC15□□□□□ -0.01
Ercc3P49135 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 AL589735.1-201ENSMUST00000224353 270 ntBASIC15□□□□□ -0.01
Ercc3P49135 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15□□□□□ -0.01
Ercc3P49135 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15□□□□□ -0.01
Ercc3P49135 Olfr582-201ENSMUST00000098212 960 ntBASIC15□□□□□ -0.01
Ercc3P49135 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ercc3P49135 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
Ercc3P49135 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc3P49135 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.99□□□□□ -0.01
Ercc3P49135 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc3P49135 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc3P49135 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc3P49135 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc3P49135 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc3P49135 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc3P49135 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc3P49135 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ercc3P49135 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Ercc3P49135 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ercc3P49135 Gm15370-201ENSMUST00000117158 253 ntBASIC14.99□□□□□ -0.01
Ercc3P49135 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.99□□□□□ -0.01
Ercc3P49135 Gm13875-201ENSMUST00000120162 282 ntBASIC14.99□□□□□ -0.01
Ercc3P49135 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc3P49135 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.99□□□□□ -0.01
Ercc3P49135 Gm5781-201ENSMUST00000219792 443 ntBASIC14.99□□□□□ -0.01
Ercc3P49135 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.99□□□□□ -0.01
Ercc3P49135 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc3P49135 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ercc3P49135 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ercc3P49135 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc3P49135 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.99□□□□□ -0.01
Ercc3P49135 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
Ercc3P49135 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc3P49135 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.99□□□□□ -0.01
Ercc3P49135 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Ercc3P49135 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc3P49135 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Ercc3P49135 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc3P49135 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.98□□□□□ -0.01
Ercc3P49135 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc3P49135 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc3P49135 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.98□□□□□ -0.01
Ercc3P49135 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc3P49135 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.98□□□□□ -0.01
Ercc3P49135 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ercc3P49135 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc3P49135 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc3P49135 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ercc3P49135 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.98□□□□□ -0.01
Ercc3P49135 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.98□□□□□ -0.01
Ercc3P49135 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Ercc3P49135 Gm15198-201ENSMUST00000117283 177 ntBASIC14.98□□□□□ -0.01
Ercc3P49135 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc3P49135 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.98□□□□□ -0.01
Ercc3P49135 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.98□□□□□ -0.01
Ercc3P49135 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.98□□□□□ -0.01
Ercc3P49135 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc3P49135 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc3P49135 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ercc3P49135 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc3P49135 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc3P49135 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc3P49135 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ercc3P49135 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc3P49135 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc3P49135 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc3P49135 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.98□□□□□ -0.01
Ercc3P49135 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc3P49135 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc3P49135 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc3P49135 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms