Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Brca1P48754 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.91□□□□□ -0.18
Brca1P48754 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Brca1P48754 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Brca1P48754 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.91□□□□□ -0.18
Brca1P48754 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.91□□□□□ -0.18
Brca1P48754 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Brca1P48754 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Brca1P48754 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Brca1P48754 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Brca1P48754 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Brca1P48754 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Brca1P48754 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Brca1P48754 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Brca1P48754 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Brca1P48754 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Brca1P48754 Gm15352-201ENSMUST00000118696 270 ntBASIC13.91□□□□□ -0.18
Brca1P48754 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.91□□□□□ -0.18
Brca1P48754 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.91□□□□□ -0.18
Brca1P48754 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.91□□□□□ -0.18
Brca1P48754 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.91□□□□□ -0.18
Brca1P48754 Gm17877-201ENSMUST00000192578 814 ntBASIC13.91□□□□□ -0.18
Brca1P48754 Gm37299-201ENSMUST00000193951 826 ntBASIC13.91□□□□□ -0.18
Brca1P48754 Gm18711-201ENSMUST00000199341 750 ntBASIC13.91□□□□□ -0.18
Brca1P48754 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Brca1P48754 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.91□□□□□ -0.18
Brca1P48754 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.91□□□□□ -0.18
Brca1P48754 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.91□□□□□ -0.18
Brca1P48754 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Brca1P48754 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.91□□□□□ -0.18
Brca1P48754 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.91□□□□□ -0.18
Brca1P48754 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.91□□□□□ -0.18
Brca1P48754 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Brca1P48754 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Brca1P48754 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.91□□□□□ -0.18
Brca1P48754 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.91□□□□□ -0.18
Brca1P48754 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Brca1P48754 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Brca1P48754 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.91□□□□□ -0.18
Brca1P48754 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Brca1P48754 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Brca1P48754 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Gm22877-201ENSMUST00000175451 105 ntBASIC13.9□□□□□ -0.18
Brca1P48754 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.9□□□□□ -0.18
Brca1P48754 Gm38151-201ENSMUST00000195085 289 ntBASIC13.9□□□□□ -0.18
Brca1P48754 Gm5100-201ENSMUST00000195631 589 ntBASIC13.9□□□□□ -0.18
Brca1P48754 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.9□□□□□ -0.18
Brca1P48754 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.9□□□□□ -0.18
Brca1P48754 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.9□□□□□ -0.18
Brca1P48754 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Brca1P48754 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Brca1P48754 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Brca1P48754 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.9□□□□□ -0.18
Brca1P48754 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Brca1P48754 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.9□□□□□ -0.18
Brca1P48754 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Gm14219-201ENSMUST00000120414 288 ntBASIC13.9□□□□□ -0.18
Brca1P48754 Gm8737-201ENSMUST00000122208 642 ntBASIC13.9□□□□□ -0.18
Brca1P48754 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.9□□□□□ -0.18
Brca1P48754 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.9□□□□□ -0.18
Brca1P48754 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.9□□□□□ -0.18
Brca1P48754 Gm43610-201ENSMUST00000199117 365 ntBASIC13.9□□□□□ -0.18
Brca1P48754 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.9□□□□□ -0.18
Brca1P48754 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Brca1P48754 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Brca1P48754 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Brca1P48754 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Brca1P48754 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.89□□□□□ -0.19
Brca1P48754 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Brca1P48754 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.89□□□□□ -0.19
Brca1P48754 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.89□□□□□ -0.19
Brca1P48754 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Brca1P48754 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Brca1P48754 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms