Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.43□□□□□ -0.58
Rfx3P48381 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rfx3P48381 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rfx3P48381 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rfx3P48381 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.43□□□□□ -0.58
Rfx3P48381 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rfx3P48381 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.42□□□□□ -0.58
Rfx3P48381 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rfx3P48381 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rfx3P48381 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rfx3P48381 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rfx3P48381 Mir686-201ENSMUST00000102174 109 ntBASIC11.42□□□□□ -0.58
Rfx3P48381 Gm11478-201ENSMUST00000117851 599 ntBASIC11.42□□□□□ -0.58
Rfx3P48381 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Rfx3P48381 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.42□□□□□ -0.58
Rfx3P48381 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.42□□□□□ -0.58
Rfx3P48381 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rfx3P48381 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rfx3P48381 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.42□□□□□ -0.58
Rfx3P48381 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.42□□□□□ -0.58
Rfx3P48381 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.42□□□□□ -0.58
Rfx3P48381 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.42□□□□□ -0.58
Rfx3P48381 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.42□□□□□ -0.58
Rfx3P48381 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rfx3P48381 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rfx3P48381 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rfx3P48381 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rfx3P48381 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rfx3P48381 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.42□□□□□ -0.58
Rfx3P48381 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rfx3P48381 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rfx3P48381 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Rfx3P48381 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.41□□□□□ -0.58
Rfx3P48381 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.41□□□□□ -0.58
Rfx3P48381 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.41□□□□□ -0.58
Rfx3P48381 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Rfx3P48381 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Rfx3P48381 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rfx3P48381 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.41□□□□□ -0.58
Rfx3P48381 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.41□□□□□ -0.58
Rfx3P48381 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Gm11618-201ENSMUST00000117946 267 ntBASIC11.41□□□□□ -0.58
Rfx3P48381 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.41□□□□□ -0.58
Rfx3P48381 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.41□□□□□ -0.58
Rfx3P48381 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.41□□□□□ -0.58
Rfx3P48381 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.41□□□□□ -0.58
Rfx3P48381 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.41□□□□□ -0.58
Rfx3P48381 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.41□□□□□ -0.58
Rfx3P48381 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.41□□□□□ -0.58
Rfx3P48381 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rfx3P48381 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.41□□□□□ -0.58
Rfx3P48381 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms