Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Xcl1P47993 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Xcl1P47993 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC8.12□□□□□ -1.11
Xcl1P47993 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC8.12□□□□□ -1.11
Xcl1P47993 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Xcl1P47993 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC8.12□□□□□ -1.11
Xcl1P47993 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC8.11□□□□□ -1.11
Xcl1P47993 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Gm43963-201ENSMUST00000203466 2488 ntBASIC8.11□□□□□ -1.11
Xcl1P47993 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC8.11□□□□□ -1.11
Xcl1P47993 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
Xcl1P47993 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Xcl1P47993 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Gm13294-201ENSMUST00000121757 1330 ntBASIC8.11□□□□□ -1.11
Xcl1P47993 Gm4735-201ENSMUST00000138679 1302 ntBASIC8.11□□□□□ -1.11
Xcl1P47993 Gm5855-201ENSMUST00000200240 1305 ntBASIC8.11□□□□□ -1.11
Xcl1P47993 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Xcl1P47993 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC8.11□□□□□ -1.11
Xcl1P47993 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC8.11□□□□□ -1.11
Xcl1P47993 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC8.11□□□□□ -1.11
Xcl1P47993 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC8.11□□□□□ -1.11
Xcl1P47993 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Gm5682-201ENSMUST00000173402 505 ntBASIC8.11□□□□□ -1.11
Xcl1P47993 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Xcl1P47993 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Xcl1P47993 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Xcl1P47993 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Xcl1P47993 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
Xcl1P47993 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Xcl1P47993 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Xcl1P47993 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC8.11□□□□□ -1.11
Xcl1P47993 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Gm43172-201ENSMUST00000202139 2137 ntBASIC8.11□□□□□ -1.11
Xcl1P47993 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Xcl1P47993 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Xcl1P47993 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Xcl1P47993 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms