Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sox6P40645 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.88□□□□□ -0.51
Sox6P40645 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.88□□□□□ -0.51
Sox6P40645 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Sox6P40645 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.88□□□□□ -0.51
Sox6P40645 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Gm27892-201ENSMUST00000185017 106 ntBASIC11.88□□□□□ -0.51
Sox6P40645 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.88□□□□□ -0.51
Sox6P40645 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sox6P40645 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.88□□□□□ -0.51
Sox6P40645 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Sox6P40645 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.88□□□□□ -0.51
Sox6P40645 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.88□□□□□ -0.51
Sox6P40645 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sox6P40645 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sox6P40645 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.88□□□□□ -0.51
Sox6P40645 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.88□□□□□ -0.51
Sox6P40645 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox6P40645 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sox6P40645 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Sox6P40645 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sox6P40645 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sox6P40645 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Sox6P40645 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.87□□□□□ -0.51
Sox6P40645 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Gm6244-201ENSMUST00000178732 841 ntBASIC11.87□□□□□ -0.51
Sox6P40645 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.87□□□□□ -0.51
Sox6P40645 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Sox6P40645 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sox6P40645 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox6P40645 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Sox6P40645 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.86□□□□□ -0.51
Sox6P40645 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.86□□□□□ -0.51
Sox6P40645 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.86□□□□□ -0.51
Sox6P40645 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sox6P40645 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms