Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.73□□□□□ -0.37
Fen1P39749 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.73□□□□□ -0.37
Fen1P39749 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Fen1P39749 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.73□□□□□ -0.37
Fen1P39749 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.73□□□□□ -0.37
Fen1P39749 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.73□□□□□ -0.37
Fen1P39749 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.73□□□□□ -0.37
Fen1P39749 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Fen1P39749 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Fen1P39749 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fen1P39749 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Fen1P39749 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.72□□□□□ -0.37
Fen1P39749 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Fen1P39749 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Fen1P39749 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.72□□□□□ -0.37
Fen1P39749 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Fen1P39749 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Fen1P39749 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.72□□□□□ -0.37
Fen1P39749 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.72□□□□□ -0.37
Fen1P39749 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.72□□□□□ -0.37
Fen1P39749 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Fen1P39749 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.72□□□□□ -0.37
Fen1P39749 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Fen1P39749 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.72□□□□□ -0.37
Fen1P39749 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Fen1P39749 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Fen1P39749 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Fen1P39749 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.72□□□□□ -0.37
Fen1P39749 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Fen1P39749 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Fen1P39749 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fen1P39749 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.71□□□□□ -0.37
Fen1P39749 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fen1P39749 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fen1P39749 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Fen1P39749 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fen1P39749 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fen1P39749 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fen1P39749 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Fen1P39749 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Fen1P39749 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.71□□□□□ -0.37
Fen1P39749 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.71□□□□□ -0.37
Fen1P39749 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fen1P39749 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fen1P39749 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Fen1P39749 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fen1P39749 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.71□□□□□ -0.37
Fen1P39749 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.71□□□□□ -0.37
Fen1P39749 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.71□□□□□ -0.37
Fen1P39749 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fen1P39749 Gm29667-201ENSMUST00000190817 490 ntBASIC12.71□□□□□ -0.37
Fen1P39749 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fen1P39749 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Fen1P39749 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fen1P39749 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Fen1P39749 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fen1P39749 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fen1P39749 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fen1P39749 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fen1P39749 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Fen1P39749 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Fen1P39749 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms