Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
HmgclP38060 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HmgclP38060 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HmgclP38060 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.45□□□□□ -0.42
HmgclP38060 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.45□□□□□ -0.42
HmgclP38060 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.45□□□□□ -0.42
HmgclP38060 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.45□□□□□ -0.42
HmgclP38060 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HmgclP38060 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HmgclP38060 Gm45925-201ENSMUST00000218882 744 ntBASIC12.45□□□□□ -0.42
HmgclP38060 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HmgclP38060 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
HmgclP38060 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HmgclP38060 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
HmgclP38060 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
HmgclP38060 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HmgclP38060 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HmgclP38060 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
HmgclP38060 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HmgclP38060 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.45□□□□□ -0.42
HmgclP38060 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HmgclP38060 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
HmgclP38060 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
HmgclP38060 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
HmgclP38060 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
HmgclP38060 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
HmgclP38060 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HmgclP38060 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HmgclP38060 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.44□□□□□ -0.42
HmgclP38060 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 AY702102-202ENSMUST00000194651 1173 ntBASIC12.44□□□□□ -0.42
HmgclP38060 Gm19184-201ENSMUST00000196798 928 ntBASIC12.44□□□□□ -0.42
HmgclP38060 Gm44405-201ENSMUST00000198952 126 ntBASIC12.44□□□□□ -0.42
HmgclP38060 Gm19309-201ENSMUST00000218295 205 ntBASIC12.44□□□□□ -0.42
HmgclP38060 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.44□□□□□ -0.42
HmgclP38060 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
HmgclP38060 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
HmgclP38060 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.44□□□□□ -0.42
HmgclP38060 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
HmgclP38060 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
HmgclP38060 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
HmgclP38060 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HmgclP38060 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HmgclP38060 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HmgclP38060 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HmgclP38060 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
HmgclP38060 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HmgclP38060 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HmgclP38060 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HmgclP38060 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HmgclP38060 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HmgclP38060 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
HmgclP38060 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HmgclP38060 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HmgclP38060 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HmgclP38060 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
HmgclP38060 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.43□□□□□ -0.42
HmgclP38060 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.43□□□□□ -0.42
HmgclP38060 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.43□□□□□ -0.42
HmgclP38060 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.43□□□□□ -0.42
HmgclP38060 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.43□□□□□ -0.42
HmgclP38060 Gm44124-201ENSMUST00000204159 472 ntBASIC12.43□□□□□ -0.42
HmgclP38060 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.43□□□□□ -0.42
HmgclP38060 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HmgclP38060 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
HmgclP38060 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
HmgclP38060 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.43□□□□□ -0.42
HmgclP38060 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
HmgclP38060 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HmgclP38060 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HmgclP38060 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.43□□□□□ -0.42
HmgclP38060 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HmgclP38060 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms