Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Thbs1P35441 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Gm4984-201ENSMUST00000115987 360 ntBASIC11.74□□□□□ -0.53
Thbs1P35441 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.74□□□□□ -0.53
Thbs1P35441 Gm15703-201ENSMUST00000120250 880 ntBASIC11.74□□□□□ -0.53
Thbs1P35441 Gm27847-201ENSMUST00000183711 107 ntBASIC11.74□□□□□ -0.53
Thbs1P35441 Gm27375-201ENSMUST00000183799 107 ntBASIC11.74□□□□□ -0.53
Thbs1P35441 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Thbs1P35441 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC11.74□□□□□ -0.53
Thbs1P35441 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.74□□□□□ -0.53
Thbs1P35441 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.74□□□□□ -0.53
Thbs1P35441 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Thbs1P35441 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Thbs1P35441 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Thbs1P35441 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Thbs1P35441 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs1P35441 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.74□□□□□ -0.53
Thbs1P35441 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Thbs1P35441 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Thbs1P35441 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Thbs1P35441 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.73□□□□□ -0.53
Thbs1P35441 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Gm14201-201ENSMUST00000117627 289 ntBASIC11.73□□□□□ -0.53
Thbs1P35441 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.73□□□□□ -0.53
Thbs1P35441 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Gm16296-201ENSMUST00000159905 325 ntBASIC11.73□□□□□ -0.53
Thbs1P35441 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Thbs1P35441 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.73□□□□□ -0.53
Thbs1P35441 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.73□□□□□ -0.53
Thbs1P35441 Gm32025-201ENSMUST00000217960 307 ntBASIC11.73□□□□□ -0.53
Thbs1P35441 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.73□□□□□ -0.53
Thbs1P35441 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC11.73□□□□□ -0.53
Thbs1P35441 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Thbs1P35441 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs1P35441 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC11.73□□□□□ -0.53
Thbs1P35441 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs1P35441 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs1P35441 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs1P35441 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs1P35441 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs1P35441 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs1P35441 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.72□□□□□ -0.53
Thbs1P35441 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Thbs1P35441 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs1P35441 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs1P35441 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs1P35441 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs1P35441 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.72□□□□□ -0.53
Thbs1P35441 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs1P35441 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs1P35441 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Thbs1P35441 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Thbs1P35441 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms