Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Mmp13P33435 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.94□□□□□ -0.34
Mmp13P33435 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Mmp13P33435 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Mmp13P33435 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
Mmp13P33435 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Mmp13P33435 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp13P33435 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Mmp13P33435 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.93□□□□□ -0.34
Mmp13P33435 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Mmp13P33435 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.93□□□□□ -0.34
Mmp13P33435 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.93□□□□□ -0.34
Mmp13P33435 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.93□□□□□ -0.34
Mmp13P33435 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.93□□□□□ -0.34
Mmp13P33435 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Mmp13P33435 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Mmp13P33435 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Mmp13P33435 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.93□□□□□ -0.34
Mmp13P33435 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.93□□□□□ -0.34
Mmp13P33435 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.93□□□□□ -0.34
Mmp13P33435 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp13P33435 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.92□□□□□ -0.34
Mmp13P33435 Gm10156-201ENSMUST00000122364 462 ntBASIC12.92□□□□□ -0.34
Mmp13P33435 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.92□□□□□ -0.34
Mmp13P33435 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.92□□□□□ -0.34
Mmp13P33435 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.92□□□□□ -0.34
Mmp13P33435 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Mir1982-201ENSMUST00000157368 74 ntBASIC12.92□□□□□ -0.34
Mmp13P33435 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Mmp13P33435 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.92□□□□□ -0.34
Mmp13P33435 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.92□□□□□ -0.34
Mmp13P33435 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.92□□□□□ -0.34
Mmp13P33435 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Mmp13P33435 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.92□□□□□ -0.34
Mmp13P33435 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.92□□□□□ -0.34
Mmp13P33435 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.92□□□□□ -0.34
Mmp13P33435 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp13P33435 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms