Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a11P31650 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Slc6a11P31650 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a11P31650 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a11P31650 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a11P31650 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.02□□□□□ -0.49
Slc6a11P31650 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a11P31650 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Slc6a11P31650 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a11P31650 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.02□□□□□ -0.49
Slc6a11P31650 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a11P31650 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a11P31650 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a11P31650 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Slc6a11P31650 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a11P31650 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a11P31650 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a11P31650 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a11P31650 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Slc6a11P31650 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Slc6a11P31650 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a11P31650 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a11P31650 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Slc6a11P31650 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a11P31650 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a11P31650 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Slc6a11P31650 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.01□□□□□ -0.49
Slc6a11P31650 Gm14350-201ENSMUST00000116642 640 ntBASIC12.01□□□□□ -0.49
Slc6a11P31650 Gm13612-201ENSMUST00000119276 390 ntBASIC12.01□□□□□ -0.49
Slc6a11P31650 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.01□□□□□ -0.49
Slc6a11P31650 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Slc6a11P31650 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.01□□□□□ -0.49
Slc6a11P31650 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Slc6a11P31650 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Slc6a11P31650 Gm27514-201ENSMUST00000183692 110 ntBASIC12.01□□□□□ -0.49
Slc6a11P31650 Gm38266-201ENSMUST00000194931 421 ntBASIC12.01□□□□□ -0.49
Slc6a11P31650 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.01□□□□□ -0.49
Slc6a11P31650 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a11P31650 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a11P31650 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a11P31650 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Slc6a11P31650 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Slc6a11P31650 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.01□□□□□ -0.49
Slc6a11P31650 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Slc6a11P31650 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a11P31650 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a11P31650 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a11P31650 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a11P31650 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.01□□□□□ -0.49
Slc6a11P31650 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.01□□□□□ -0.49
Slc6a11P31650 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.01□□□□□ -0.49
Slc6a11P31650 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.01□□□□□ -0.49
Slc6a11P31650 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a11P31650 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Slc6a11P31650 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Slc6a11P31650 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Gm14723-201ENSMUST00000118686 215 ntBASIC12□□□□□ -0.49
Slc6a11P31650 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12□□□□□ -0.49
Slc6a11P31650 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Gm44397-201ENSMUST00000195950 113 ntBASIC12□□□□□ -0.49
Slc6a11P31650 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12□□□□□ -0.49
Slc6a11P31650 Gm43822-201ENSMUST00000200285 476 ntBASIC12□□□□□ -0.49
Slc6a11P31650 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12□□□□□ -0.49
Slc6a11P31650 Gm45880-201ENSMUST00000213041 853 ntBASIC12□□□□□ -0.49
Slc6a11P31650 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12□□□□□ -0.49
Slc6a11P31650 AC169036.1-201ENSMUST00000227994 296 ntBASIC12□□□□□ -0.49
Slc6a11P31650 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Gm17383-201ENSMUST00000078739 1041 ntBASIC12□□□□□ -0.49
Slc6a11P31650 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Slc6a11P31650 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Slc6a11P31650 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Slc6a11P31650 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Slc6a11P31650 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Slc6a11P31650 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a11P31650 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Slc6a11P31650 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms