Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RxrbP28704 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.69□□□□□ -0.38
RxrbP28704 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RxrbP28704 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
RxrbP28704 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RxrbP28704 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RxrbP28704 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RxrbP28704 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RxrbP28704 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RxrbP28704 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RxrbP28704 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.68□□□□□ -0.38
RxrbP28704 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.68□□□□□ -0.38
RxrbP28704 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RxrbP28704 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RxrbP28704 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RxrbP28704 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
RxrbP28704 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RxrbP28704 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.68□□□□□ -0.38
RxrbP28704 Gm44397-201ENSMUST00000195950 113 ntBASIC12.68□□□□□ -0.38
RxrbP28704 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.68□□□□□ -0.38
RxrbP28704 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.68□□□□□ -0.38
RxrbP28704 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.68□□□□□ -0.38
RxrbP28704 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RxrbP28704 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.68□□□□□ -0.38
RxrbP28704 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RxrbP28704 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.68□□□□□ -0.38
RxrbP28704 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
RxrbP28704 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RxrbP28704 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC12.68□□□□□ -0.38
RxrbP28704 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RxrbP28704 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RxrbP28704 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RxrbP28704 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RxrbP28704 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
RxrbP28704 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RxrbP28704 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RxrbP28704 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.67□□□□□ -0.38
RxrbP28704 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.67□□□□□ -0.38
RxrbP28704 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.67□□□□□ -0.38
RxrbP28704 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.67□□□□□ -0.38
RxrbP28704 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 Gm16215-201ENSMUST00000161990 637 ntBASIC12.67□□□□□ -0.38
RxrbP28704 Gm18307-201ENSMUST00000206864 949 ntBASIC12.67□□□□□ -0.38
RxrbP28704 Gm6983-201ENSMUST00000214912 628 ntBASIC12.67□□□□□ -0.38
RxrbP28704 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.67□□□□□ -0.38
RxrbP28704 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.67□□□□□ -0.38
RxrbP28704 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RxrbP28704 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.67□□□□□ -0.38
RxrbP28704 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
RxrbP28704 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.67□□□□□ -0.38
RxrbP28704 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
RxrbP28704 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RxrbP28704 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RxrbP28704 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RxrbP28704 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.66□□□□□ -0.38
RxrbP28704 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.66□□□□□ -0.38
RxrbP28704 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.66□□□□□ -0.38
RxrbP28704 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RxrbP28704 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms