Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Nckap1P28660 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nckap1P28660 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.61□□□□□ -0.39
Nckap1P28660 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Gm14109-201ENSMUST00000118814 309 ntBASIC12.61□□□□□ -0.39
Nckap1P28660 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.61□□□□□ -0.39
Nckap1P28660 Gm25043-201ENSMUST00000158604 212 ntBASIC12.61□□□□□ -0.39
Nckap1P28660 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.61□□□□□ -0.39
Nckap1P28660 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Mir3102-201ENSMUST00000175555 104 ntBASIC12.61□□□□□ -0.39
Nckap1P28660 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.61□□□□□ -0.39
Nckap1P28660 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.61□□□□□ -0.39
Nckap1P28660 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.61□□□□□ -0.39
Nckap1P28660 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nckap1P28660 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.61□□□□□ -0.39
Nckap1P28660 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.61□□□□□ -0.39
Nckap1P28660 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.61□□□□□ -0.39
Nckap1P28660 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nckap1P28660 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.6□□□□□ -0.39
Nckap1P28660 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Nckap1P28660 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.6□□□□□ -0.39
Nckap1P28660 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Nckap1P28660 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nckap1P28660 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nckap1P28660 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Gm13736-201ENSMUST00000119272 253 ntBASIC12.6□□□□□ -0.39
Nckap1P28660 Gm13665-201ENSMUST00000120830 528 ntBASIC12.6□□□□□ -0.39
Nckap1P28660 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.6□□□□□ -0.39
Nckap1P28660 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.6□□□□□ -0.39
Nckap1P28660 Gm8018-201ENSMUST00000173536 789 ntBASIC12.6□□□□□ -0.39
Nckap1P28660 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.6□□□□□ -0.39
Nckap1P28660 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Nckap1P28660 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.6□□□□□ -0.39
Nckap1P28660 Gm18041-201ENSMUST00000218210 618 ntBASIC12.6□□□□□ -0.39
Nckap1P28660 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.6□□□□□ -0.39
Nckap1P28660 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Nckap1P28660 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.6□□□□□ -0.39
Nckap1P28660 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.6□□□□□ -0.39
Nckap1P28660 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Nckap1P28660 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
Nckap1P28660 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nckap1P28660 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nckap1P28660 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Nckap1P28660 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.59□□□□□ -0.39
Nckap1P28660 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nckap1P28660 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nckap1P28660 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nckap1P28660 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nckap1P28660 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Nckap1P28660 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nckap1P28660 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Nckap1P28660 Gm13813-201ENSMUST00000120998 787 ntBASIC12.59□□□□□ -0.39
Nckap1P28660 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nckap1P28660 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nckap1P28660 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.59□□□□□ -0.39
Nckap1P28660 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nckap1P28660 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.59□□□□□ -0.39
Nckap1P28660 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nckap1P28660 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.59□□□□□ -0.39
Nckap1P28660 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms