Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.15□□□□□ -0.14
Col2a1P28481 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Col2a1P28481 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.15□□□□□ -0.14
Col2a1P28481 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Col2a1P28481 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.14□□□□□ -0.15
Col2a1P28481 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
Col2a1P28481 Gm8199-201ENSMUST00000121323 823 ntBASIC14.14□□□□□ -0.15
Col2a1P28481 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.14□□□□□ -0.15
Col2a1P28481 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Col2a1P28481 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Col2a1P28481 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.14□□□□□ -0.15
Col2a1P28481 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Col2a1P28481 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.14□□□□□ -0.15
Col2a1P28481 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.14□□□□□ -0.15
Col2a1P28481 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.14□□□□□ -0.15
Col2a1P28481 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Col2a1P28481 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col2a1P28481 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col2a1P28481 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col2a1P28481 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col2a1P28481 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col2a1P28481 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Col2a1P28481 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col2a1P28481 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Col2a1P28481 Gm13408-201ENSMUST00000119822 798 ntBASIC14.13□□□□□ -0.15
Col2a1P28481 Gm13935-201ENSMUST00000121859 798 ntBASIC14.13□□□□□ -0.15
Col2a1P28481 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col2a1P28481 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Col2a1P28481 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.13□□□□□ -0.15
Col2a1P28481 Gm23699-201ENSMUST00000158835 135 ntBASIC14.13□□□□□ -0.15
Col2a1P28481 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.13□□□□□ -0.15
Col2a1P28481 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.13□□□□□ -0.15
Col2a1P28481 Gm2965-201ENSMUST00000198365 343 ntBASIC14.13□□□□□ -0.15
Col2a1P28481 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col2a1P28481 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col2a1P28481 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col2a1P28481 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col2a1P28481 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.13□□□□□ -0.15
Col2a1P28481 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col2a1P28481 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.13□□□□□ -0.15
Col2a1P28481 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col2a1P28481 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col2a1P28481 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.13□□□□□ -0.15
Col2a1P28481 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col2a1P28481 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col2a1P28481 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Col2a1P28481 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col2a1P28481 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col2a1P28481 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col2a1P28481 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col2a1P28481 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col2a1P28481 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Col2a1P28481 Gm9062-201ENSMUST00000117712 727 ntBASIC14.12□□□□□ -0.15
Col2a1P28481 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.12□□□□□ -0.15
Col2a1P28481 Gm17931-201ENSMUST00000208132 634 ntBASIC14.12□□□□□ -0.15
Col2a1P28481 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col2a1P28481 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.12□□□□□ -0.15
Col2a1P28481 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Col2a1P28481 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.12□□□□□ -0.15
Col2a1P28481 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Col2a1P28481 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.12□□□□□ -0.15
Col2a1P28481 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Col2a1P28481 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col2a1P28481 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col2a1P28481 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Col2a1P28481 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col2a1P28481 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col2a1P28481 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Col2a1P28481 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.12□□□□□ -0.15
Col2a1P28481 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Col2a1P28481 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col2a1P28481 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Col2a1P28481 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col2a1P28481 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col2a1P28481 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col2a1P28481 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col2a1P28481 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms