Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
BdnfP21237 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.14□□□□□ -0.47
BdnfP21237 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.14□□□□□ -0.47
BdnfP21237 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.14□□□□□ -0.47
BdnfP21237 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
BdnfP21237 Gm12928-201ENSMUST00000117115 573 ntBASIC12.14□□□□□ -0.47
BdnfP21237 Gm13813-201ENSMUST00000120998 787 ntBASIC12.14□□□□□ -0.47
BdnfP21237 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.14□□□□□ -0.47
BdnfP21237 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.14□□□□□ -0.47
BdnfP21237 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
BdnfP21237 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.14□□□□□ -0.47
BdnfP21237 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.14□□□□□ -0.47
BdnfP21237 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.14□□□□□ -0.47
BdnfP21237 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.14□□□□□ -0.47
BdnfP21237 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.14□□□□□ -0.47
BdnfP21237 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
BdnfP21237 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
BdnfP21237 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
BdnfP21237 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.14□□□□□ -0.47
BdnfP21237 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
BdnfP21237 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
BdnfP21237 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Gm37447-201ENSMUST00000195625 2928 ntBASIC12.14□□□□□ -0.47
BdnfP21237 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BdnfP21237 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
BdnfP21237 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
BdnfP21237 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
BdnfP21237 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.13□□□□□ -0.47
BdnfP21237 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.13□□□□□ -0.47
BdnfP21237 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.13□□□□□ -0.47
BdnfP21237 Gm16202-201ENSMUST00000117532 544 ntBASIC12.13□□□□□ -0.47
BdnfP21237 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.13□□□□□ -0.47
BdnfP21237 Gm6152-201ENSMUST00000151704 340 ntBASIC12.13□□□□□ -0.47
BdnfP21237 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Gm2495-201ENSMUST00000191160 466 ntBASIC12.13□□□□□ -0.47
BdnfP21237 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.13□□□□□ -0.47
BdnfP21237 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.13□□□□□ -0.47
BdnfP21237 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
BdnfP21237 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
BdnfP21237 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
BdnfP21237 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
BdnfP21237 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
BdnfP21237 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
BdnfP21237 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.12□□□□□ -0.47
BdnfP21237 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
BdnfP21237 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms