Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VimP20152 Gm26035-201ENSMUST00000083065 308 ntBASIC12.8□□□□□ -0.36
VimP20152 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
VimP20152 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VimP20152 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.8□□□□□ -0.36
VimP20152 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
VimP20152 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VimP20152 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VimP20152 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
VimP20152 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
VimP20152 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
VimP20152 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VimP20152 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VimP20152 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VimP20152 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VimP20152 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VimP20152 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.79□□□□□ -0.36
VimP20152 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.79□□□□□ -0.36
VimP20152 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
VimP20152 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
VimP20152 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
VimP20152 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.79□□□□□ -0.36
VimP20152 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Gm38144-201ENSMUST00000192790 465 ntBASIC12.79□□□□□ -0.36
VimP20152 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.79□□□□□ -0.36
VimP20152 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Shd-206ENSMUST00000225145 998 ntBASIC12.79□□□□□ -0.36
VimP20152 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.79□□□□□ -0.36
VimP20152 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.79□□□□□ -0.36
VimP20152 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.79□□□□□ -0.36
VimP20152 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
VimP20152 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
VimP20152 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
VimP20152 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
VimP20152 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.78□□□□□ -0.36
VimP20152 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.78□□□□□ -0.36
VimP20152 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
VimP20152 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VimP20152 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VimP20152 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VimP20152 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VimP20152 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VimP20152 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.78□□□□□ -0.36
VimP20152 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VimP20152 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VimP20152 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VimP20152 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VimP20152 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VimP20152 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VimP20152 Gm25287-201ENSMUST00000103846 110 ntBASIC12.78□□□□□ -0.36
VimP20152 Gm22918-201ENSMUST00000103855 110 ntBASIC12.78□□□□□ -0.36
VimP20152 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VimP20152 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.78□□□□□ -0.36
VimP20152 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.78□□□□□ -0.36
VimP20152 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.78□□□□□ -0.36
VimP20152 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.78□□□□□ -0.36
VimP20152 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.78□□□□□ -0.36
VimP20152 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.78□□□□□ -0.36
VimP20152 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.78□□□□□ -0.36
VimP20152 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VimP20152 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.78□□□□□ -0.36
VimP20152 Gm46209-201ENSMUST00000217912 553 ntBASIC12.78□□□□□ -0.36
VimP20152 Gm8227-201ENSMUST00000223306 571 ntBASIC12.78□□□□□ -0.36
VimP20152 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
VimP20152 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VimP20152 Gm24447-201ENSMUST00000083977 338 ntBASIC12.78□□□□□ -0.36
VimP20152 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.78□□□□□ -0.36
VimP20152 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VimP20152 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VimP20152 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms