Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sdc1P18828 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Sdc1P18828 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.33□□□□□ -0.76
Sdc1P18828 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.32□□□□□ -0.76
Sdc1P18828 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Sdc1P18828 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.32□□□□□ -0.76
Sdc1P18828 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.32□□□□□ -0.76
Sdc1P18828 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.32□□□□□ -0.76
Sdc1P18828 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.32□□□□□ -0.76
Sdc1P18828 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.32□□□□□ -0.76
Sdc1P18828 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Sdc1P18828 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Gm13813-201ENSMUST00000120998 787 ntBASIC10.32□□□□□ -0.76
Sdc1P18828 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.32□□□□□ -0.76
Sdc1P18828 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.32□□□□□ -0.76
Sdc1P18828 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC10.32□□□□□ -0.76
Sdc1P18828 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.32□□□□□ -0.76
Sdc1P18828 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC10.32□□□□□ -0.76
Sdc1P18828 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Sdc1P18828 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.32□□□□□ -0.76
Sdc1P18828 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.32□□□□□ -0.76
Sdc1P18828 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.32□□□□□ -0.76
Sdc1P18828 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.32□□□□□ -0.76
Sdc1P18828 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Sdc1P18828 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sdc1P18828 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.31□□□□□ -0.76
Sdc1P18828 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.31□□□□□ -0.76
Sdc1P18828 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Sdc1P18828 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
Sdc1P18828 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 Gm24589-201ENSMUST00000116692 94 ntBASIC10.31□□□□□ -0.76
Sdc1P18828 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC10.31□□□□□ -0.76
Sdc1P18828 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Sdc1P18828 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.31□□□□□ -0.76
Sdc1P18828 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC10.31□□□□□ -0.76
Sdc1P18828 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.31□□□□□ -0.76
Sdc1P18828 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Sdc1P18828 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.31□□□□□ -0.76
Sdc1P18828 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 BC043934-202ENSMUST00000185694 2356 ntBASIC10.31□□□□□ -0.76
Sdc1P18828 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.31□□□□□ -0.76
Sdc1P18828 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Sdc1P18828 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sdc1P18828 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sdc1P18828 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms