Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cntn1P12960 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Gm44405-201ENSMUST00000198952 126 ntBASIC12.13□□□□□ -0.47
Cntn1P12960 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.13□□□□□ -0.47
Cntn1P12960 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.13□□□□□ -0.47
Cntn1P12960 Gm30285-201ENSMUST00000214614 422 ntBASIC12.13□□□□□ -0.47
Cntn1P12960 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.13□□□□□ -0.47
Cntn1P12960 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.13□□□□□ -0.47
Cntn1P12960 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.13□□□□□ -0.47
Cntn1P12960 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.13□□□□□ -0.47
Cntn1P12960 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Cntn1P12960 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.13□□□□□ -0.47
Cntn1P12960 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cntn1P12960 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cntn1P12960 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cntn1P12960 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.12□□□□□ -0.47
Cntn1P12960 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.12□□□□□ -0.47
Cntn1P12960 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn1P12960 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn1P12960 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn1P12960 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn1P12960 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn1P12960 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn1P12960 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.12□□□□□ -0.47
Cntn1P12960 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn1P12960 Gm22323-201ENSMUST00000103832 109 ntBASIC12.12□□□□□ -0.47
Cntn1P12960 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cntn1P12960 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.12□□□□□ -0.47
Cntn1P12960 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.12□□□□□ -0.47
Cntn1P12960 Gm11531-201ENSMUST00000117614 555 ntBASIC12.12□□□□□ -0.47
Cntn1P12960 Gm11222-201ENSMUST00000119005 738 ntBASIC12.12□□□□□ -0.47
Cntn1P12960 Gm26956-201ENSMUST00000182176 986 ntBASIC12.12□□□□□ -0.47
Cntn1P12960 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn1P12960 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.12□□□□□ -0.47
Cntn1P12960 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.12□□□□□ -0.47
Cntn1P12960 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Cntn1P12960 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.12□□□□□ -0.47
Cntn1P12960 Gm45925-201ENSMUST00000218882 744 ntBASIC12.12□□□□□ -0.47
Cntn1P12960 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Cntn1P12960 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.12□□□□□ -0.47
Cntn1P12960 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn1P12960 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn1P12960 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cntn1P12960 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn1P12960 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn1P12960 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.12□□□□□ -0.47
Cntn1P12960 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn1P12960 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cntn1P12960 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn1P12960 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cntn1P12960 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Cntn1P12960 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn1P12960 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn1P12960 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cntn1P12960 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn1P12960 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.11□□□□□ -0.47
Cntn1P12960 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn1P12960 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cntn1P12960 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn1P12960 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn1P12960 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn1P12960 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn1P12960 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn1P12960 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn1P12960 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn1P12960 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn1P12960 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.11□□□□□ -0.47
Cntn1P12960 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.11□□□□□ -0.47
Cntn1P12960 Gm17376-201ENSMUST00000166016 84 ntBASIC12.11□□□□□ -0.47
Cntn1P12960 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.11□□□□□ -0.47
Cntn1P12960 Gm27320-201ENSMUST00000184892 109 ntBASIC12.11□□□□□ -0.47
Cntn1P12960 Gm38241-201ENSMUST00000192641 898 ntBASIC12.11□□□□□ -0.47
Cntn1P12960 Gm5950-201ENSMUST00000213337 772 ntBASIC12.11□□□□□ -0.47
Cntn1P12960 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn1P12960 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn1P12960 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cntn1P12960 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Cntn1P12960 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn1P12960 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.11□□□□□ -0.47
Cntn1P12960 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn1P12960 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.11□□□□□ -0.47
Cntn1P12960 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn1P12960 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.11□□□□□ -0.47
Cntn1P12960 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms