Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC16.27■□□□□ 0.2
Hoxc9P09633 Gm6580-201ENSMUST00000117504 1357 ntBASIC16.27■□□□□ 0.2
Hoxc9P09633 Gm6210-201ENSMUST00000204734 1942 ntBASIC16.27■□□□□ 0.2
Hoxc9P09633 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Hoxc9P09633 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc9P09633 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc9P09633 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Hoxc9P09633 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc9P09633 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Hoxc9P09633 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc9P09633 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Hoxc9P09633 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC16.27■□□□□ 0.2
Hoxc9P09633 Gm7851-201ENSMUST00000117574 323 ntBASIC16.27■□□□□ 0.2
Hoxc9P09633 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC16.27■□□□□ 0.2
Hoxc9P09633 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC16.27■□□□□ 0.2
Hoxc9P09633 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc9P09633 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc9P09633 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC16.27■□□□□ 0.2
Hoxc9P09633 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc9P09633 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxc9P09633 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxc9P09633 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.19
Hoxc9P09633 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Hoxc9P09633 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Hoxc9P09633 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxc9P09633 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxc9P09633 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxc9P09633 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxc9P09633 Gm45638-201ENSMUST00000211507 2878 ntBASIC16.27■□□□□ 0.19
Hoxc9P09633 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxc9P09633 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC16.27■□□□□ 0.19
Hoxc9P09633 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxc9P09633 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxc9P09633 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxc9P09633 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc9P09633 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc9P09633 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc9P09633 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Hoxc9P09633 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc9P09633 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc9P09633 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc9P09633 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc9P09633 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc9P09633 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC16.26■□□□□ 0.19
Hoxc9P09633 Gm7049-201ENSMUST00000223520 1712 ntBASIC16.26■□□□□ 0.19
Hoxc9P09633 Gm23596-201ENSMUST00000104304 132 ntBASIC16.26■□□□□ 0.19
Hoxc9P09633 Gm12196-201ENSMUST00000120954 262 ntBASIC16.26■□□□□ 0.19
Hoxc9P09633 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC16.26■□□□□ 0.19
Hoxc9P09633 Gm25881-201ENSMUST00000157783 103 ntBASIC16.26■□□□□ 0.19
Hoxc9P09633 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC16.26■□□□□ 0.19
Hoxc9P09633 Gm44126-201ENSMUST00000204831 514 ntBASIC16.26■□□□□ 0.19
Hoxc9P09633 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC16.26■□□□□ 0.19
Hoxc9P09633 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc9P09633 AC093022.5-201ENSMUST00000226841 1079 ntBASIC16.26■□□□□ 0.19
Hoxc9P09633 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc9P09633 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc9P09633 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc9P09633 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc9P09633 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.26■□□□□ 0.19
Hoxc9P09633 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc9P09633 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Hoxc9P09633 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc9P09633 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.26■□□□□ 0.19
Hoxc9P09633 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc9P09633 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC16.26■□□□□ 0.19
Hoxc9P09633 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxc9P09633 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Hoxc9P09633 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc9P09633 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Hoxc9P09633 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Hoxc9P09633 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc9P09633 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc9P09633 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Hoxc9P09633 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Hoxc9P09633 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC16.25■□□□□ 0.19
Hoxc9P09633 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc9P09633 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc9P09633 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc9P09633 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc9P09633 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc9P09633 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc9P09633 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc9P09633 Gm12501-201ENSMUST00000119163 529 ntBASIC16.25■□□□□ 0.19
Hoxc9P09633 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC16.25■□□□□ 0.19
Hoxc9P09633 Gm10051-201ENSMUST00000145209 414 ntBASIC16.25■□□□□ 0.19
Hoxc9P09633 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Hoxc9P09633 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc9P09633 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC16.25■□□□□ 0.19
Hoxc9P09633 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc9P09633 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc9P09633 Mir7677-201ENSMUST00000184226 67 ntBASIC16.25■□□□□ 0.19
Hoxc9P09633 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC16.25■□□□□ 0.19
Hoxc9P09633 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc9P09633 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Hoxc9P09633 D9Wsu149-201ENSMUST00000214169 594 ntBASIC16.25■□□□□ 0.19
Hoxc9P09633 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC16.25■□□□□ 0.19
Hoxc9P09633 CT009713.8-201ENSMUST00000225448 560 ntBASIC16.25■□□□□ 0.19
Hoxc9P09633 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc9P09633 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hoxc9P09633 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms