Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC18.74■□□□□ 0.59
NclP09405 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
NclP09405 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
NclP09405 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NclP09405 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
NclP09405 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NclP09405 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC18.74■□□□□ 0.59
NclP09405 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NclP09405 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NclP09405 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC18.73■□□□□ 0.59
NclP09405 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NclP09405 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NclP09405 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NclP09405 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NclP09405 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC18.73■□□□□ 0.59
NclP09405 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NclP09405 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NclP09405 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NclP09405 Gm13665-201ENSMUST00000120830 528 ntBASIC18.73■□□□□ 0.59
NclP09405 Gm14017-201ENSMUST00000121934 386 ntBASIC18.73■□□□□ 0.59
NclP09405 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC18.73■□□□□ 0.59
NclP09405 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NclP09405 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NclP09405 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC18.73■□□□□ 0.59
NclP09405 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NclP09405 Gm9678-201ENSMUST00000198979 1149 ntBASIC18.73■□□□□ 0.59
NclP09405 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NclP09405 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NclP09405 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NclP09405 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NclP09405 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC18.73■□□□□ 0.59
NclP09405 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NclP09405 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NclP09405 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NclP09405 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NclP09405 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NclP09405 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NclP09405 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NclP09405 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NclP09405 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NclP09405 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NclP09405 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NclP09405 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NclP09405 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NclP09405 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NclP09405 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
NclP09405 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NclP09405 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NclP09405 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NclP09405 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NclP09405 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC18.72■□□□□ 0.59
NclP09405 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NclP09405 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC18.72■□□□□ 0.59
NclP09405 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC18.72■□□□□ 0.59
NclP09405 Gm5363-201ENSMUST00000211927 938 ntBASIC18.72■□□□□ 0.59
NclP09405 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NclP09405 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NclP09405 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NclP09405 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NclP09405 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NclP09405 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NclP09405 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
NclP09405 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NclP09405 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC18.72■□□□□ 0.59
NclP09405 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NclP09405 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NclP09405 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NclP09405 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
NclP09405 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NclP09405 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NclP09405 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC18.71■□□□□ 0.59
NclP09405 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NclP09405 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NclP09405 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NclP09405 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC18.71■□□□□ 0.59
NclP09405 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NclP09405 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NclP09405 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NclP09405 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NclP09405 Gm14130-201ENSMUST00000118417 987 ntBASIC18.71■□□□□ 0.59
NclP09405 Gm13315-201ENSMUST00000120376 991 ntBASIC18.71■□□□□ 0.59
NclP09405 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC18.71■□□□□ 0.59
NclP09405 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC18.71■□□□□ 0.59
NclP09405 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC18.71■□□□□ 0.59
NclP09405 Rn7s1-201ENSMUST00000174924 300 ntBASIC18.71■□□□□ 0.59
NclP09405 Rn7s2-201ENSMUST00000175032 300 ntBASIC18.71■□□□□ 0.59
NclP09405 Gm26461-201ENSMUST00000175064 290 ntBASIC18.71■□□□□ 0.59
NclP09405 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC18.71■□□□□ 0.59
NclP09405 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC18.71■□□□□ 0.59
NclP09405 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC18.71■□□□□ 0.59
NclP09405 Gm45186-201ENSMUST00000206874 478 ntBASIC18.71■□□□□ 0.59
NclP09405 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NclP09405 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NclP09405 AC154222.2-201ENSMUST00000225848 607 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms