Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TnfP06804 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.39□□□□□ -0.27
TnfP06804 Gm14832-201ENSMUST00000121289 322 ntBASIC13.39□□□□□ -0.27
TnfP06804 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.39□□□□□ -0.27
TnfP06804 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.39□□□□□ -0.27
TnfP06804 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.39□□□□□ -0.27
TnfP06804 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TnfP06804 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TnfP06804 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.39□□□□□ -0.27
TnfP06804 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TnfP06804 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TnfP06804 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.39□□□□□ -0.27
TnfP06804 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.39□□□□□ -0.27
TnfP06804 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TnfP06804 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TnfP06804 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TnfP06804 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.39□□□□□ -0.27
TnfP06804 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TnfP06804 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TnfP06804 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TnfP06804 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TnfP06804 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TnfP06804 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TnfP06804 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
TnfP06804 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.39□□□□□ -0.27
TnfP06804 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TnfP06804 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TnfP06804 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TnfP06804 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.38□□□□□ -0.27
TnfP06804 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TnfP06804 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 Gm12997-201ENSMUST00000120207 640 ntBASIC13.38□□□□□ -0.27
TnfP06804 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.38□□□□□ -0.27
TnfP06804 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.38□□□□□ -0.27
TnfP06804 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.38□□□□□ -0.27
TnfP06804 Gm9022-201ENSMUST00000182482 992 ntBASIC13.38□□□□□ -0.27
TnfP06804 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.38□□□□□ -0.27
TnfP06804 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.38□□□□□ -0.27
TnfP06804 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.38□□□□□ -0.27
TnfP06804 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.38□□□□□ -0.27
TnfP06804 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.38□□□□□ -0.27
TnfP06804 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.38□□□□□ -0.27
TnfP06804 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TnfP06804 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.38□□□□□ -0.27
TnfP06804 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TnfP06804 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TnfP06804 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.38□□□□□ -0.27
TnfP06804 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.38□□□□□ -0.27
TnfP06804 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.38□□□□□ -0.27
TnfP06804 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TnfP06804 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TnfP06804 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.37□□□□□ -0.27
TnfP06804 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
TnfP06804 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Gm24231-201ENSMUST00000104315 133 ntBASIC13.37□□□□□ -0.27
TnfP06804 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.37□□□□□ -0.27
TnfP06804 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TnfP06804 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.37□□□□□ -0.27
TnfP06804 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.37□□□□□ -0.27
TnfP06804 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.37□□□□□ -0.27
TnfP06804 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.37□□□□□ -0.27
TnfP06804 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.37□□□□□ -0.27
TnfP06804 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms