Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PrnpP04925 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PrnpP04925 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PrnpP04925 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PrnpP04925 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
PrnpP04925 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PrnpP04925 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PrnpP04925 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
PrnpP04925 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PrnpP04925 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PrnpP04925 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PrnpP04925 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PrnpP04925 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PrnpP04925 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PrnpP04925 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PrnpP04925 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.06□□□□□ -0.32
PrnpP04925 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PrnpP04925 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
PrnpP04925 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
PrnpP04925 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
PrnpP04925 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 Gm24934-201ENSMUST00000103764 111 ntBASIC13.05□□□□□ -0.32
PrnpP04925 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.05□□□□□ -0.32
PrnpP04925 Gm13461-201ENSMUST00000120980 662 ntBASIC13.05□□□□□ -0.32
PrnpP04925 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.05□□□□□ -0.32
PrnpP04925 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
PrnpP04925 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.05□□□□□ -0.32
PrnpP04925 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.05□□□□□ -0.32
PrnpP04925 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.05□□□□□ -0.32
PrnpP04925 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
PrnpP04925 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.05□□□□□ -0.32
PrnpP04925 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
PrnpP04925 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.05□□□□□ -0.32
PrnpP04925 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PrnpP04925 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.05□□□□□ -0.32
PrnpP04925 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrnpP04925 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrnpP04925 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrnpP04925 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrnpP04925 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
PrnpP04925 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PrnpP04925 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrnpP04925 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrnpP04925 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrnpP04925 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.04□□□□□ -0.32
PrnpP04925 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.04□□□□□ -0.32
PrnpP04925 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.04□□□□□ -0.32
PrnpP04925 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PrnpP04925 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.04□□□□□ -0.32
PrnpP04925 Gm22133-201ENSMUST00000102082 109 ntBASIC13.04□□□□□ -0.32
PrnpP04925 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
PrnpP04925 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
PrnpP04925 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.04□□□□□ -0.32
PrnpP04925 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.04□□□□□ -0.32
PrnpP04925 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.04□□□□□ -0.32
PrnpP04925 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.04□□□□□ -0.32
PrnpP04925 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.04□□□□□ -0.32
PrnpP04925 Gm9022-201ENSMUST00000182482 992 ntBASIC13.04□□□□□ -0.32
PrnpP04925 Gm44958-201ENSMUST00000203734 736 ntBASIC13.04□□□□□ -0.32
PrnpP04925 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PrnpP04925 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.04□□□□□ -0.32
PrnpP04925 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrnpP04925 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PrnpP04925 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrnpP04925 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.04□□□□□ -0.32
PrnpP04925 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
PrnpP04925 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrnpP04925 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
PrnpP04925 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrnpP04925 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrnpP04925 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrnpP04925 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrnpP04925 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PrnpP04925 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrnpP04925 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.03□□□□□ -0.32
PrnpP04925 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrnpP04925 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.03□□□□□ -0.32
PrnpP04925 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
PrnpP04925 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrnpP04925 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrnpP04925 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms