Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.11□□□□□ -0.63
P04224 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
P04224 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.11□□□□□ -0.63
P04224 Gm15240-201ENSMUST00000118156 720 ntBASIC11.11□□□□□ -0.63
P04224 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.11□□□□□ -0.63
P04224 Gm26308-201ENSMUST00000157768 69 ntBASIC11.11□□□□□ -0.63
P04224 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.11□□□□□ -0.63
P04224 Gm27680-201ENSMUST00000184192 160 ntBASIC11.11□□□□□ -0.63
P04224 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
P04224 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.11□□□□□ -0.63
P04224 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.11□□□□□ -0.63
P04224 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.11□□□□□ -0.63
P04224 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.11□□□□□ -0.63
P04224 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.11□□□□□ -0.63
P04224 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
P04224 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.11□□□□□ -0.63
P04224 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.11□□□□□ -0.63
P04224 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.11□□□□□ -0.63
P04224 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
P04224 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P04224 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
P04224 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
P04224 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
P04224 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
P04224 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.1□□□□□ -0.63
P04224 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Gm19931-201ENSMUST00000198920 368 ntBASIC11.1□□□□□ -0.63
P04224 Gm17795-201ENSMUST00000214505 757 ntBASIC11.1□□□□□ -0.63
P04224 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.1□□□□□ -0.63
P04224 Gm17330-201ENSMUST00000221047 165 ntBASIC11.1□□□□□ -0.63
P04224 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
P04224 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.1□□□□□ -0.63
P04224 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
P04224 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
P04224 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
P04224 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
P04224 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
P04224 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04224 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.1□□□□□ -0.63
P04224 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
P04224 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
P04224 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
P04224 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.09□□□□□ -0.63
P04224 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.09□□□□□ -0.63
P04224 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.09□□□□□ -0.63
P04224 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04224 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
P04224 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms