Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt1P04104 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt1P04104 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt1P04104 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.92□□□□□ -0.5
Krt1P04104 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt1P04104 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt1P04104 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt1P04104 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Krt1P04104 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Krt1P04104 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.92□□□□□ -0.5
Krt1P04104 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.92□□□□□ -0.5
Krt1P04104 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.92□□□□□ -0.5
Krt1P04104 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Krt1P04104 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.92□□□□□ -0.5
Krt1P04104 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Krt1P04104 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Krt1P04104 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt1P04104 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Krt1P04104 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.91□□□□□ -0.5
Krt1P04104 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Krt1P04104 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.91□□□□□ -0.5
Krt1P04104 Gm6447-201ENSMUST00000118905 835 ntBASIC11.91□□□□□ -0.5
Krt1P04104 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.91□□□□□ -0.5
Krt1P04104 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Krt1P04104 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.91□□□□□ -0.5
Krt1P04104 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.91□□□□□ -0.5
Krt1P04104 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.91□□□□□ -0.5
Krt1P04104 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Krt1P04104 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.91□□□□□ -0.5
Krt1P04104 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Krt1P04104 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.91□□□□□ -0.5
Krt1P04104 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Krt1P04104 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.91□□□□□ -0.5
Krt1P04104 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Krt1P04104 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.9□□□□□ -0.5
Krt1P04104 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Krt1P04104 Gm12485-201ENSMUST00000119641 291 ntBASIC11.9□□□□□ -0.5
Krt1P04104 Mir1895-201ENSMUST00000122615 79 ntBASIC11.9□□□□□ -0.5
Krt1P04104 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Krt1P04104 Gm3436-201ENSMUST00000179930 840 ntBASIC11.9□□□□□ -0.5
Krt1P04104 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.9□□□□□ -0.5
Krt1P04104 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Krt1P04104 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.9□□□□□ -0.5
Krt1P04104 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Krt1P04104 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.9□□□□□ -0.5
Krt1P04104 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Krt1P04104 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
Krt1P04104 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.9□□□□□ -0.51
Krt1P04104 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Krt1P04104 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt1P04104 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt1P04104 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt1P04104 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.89□□□□□ -0.51
Krt1P04104 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt1P04104 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Krt1P04104 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms