Protein–RNA interactions for Protein: P01798

Ig heavy chain V-III region E109, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01798 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.82□□□□□ -0.68
P01798 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.82□□□□□ -0.68
P01798 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.82□□□□□ -0.68
P01798 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Gm11978-201ENSMUST00000122315 466 ntBASIC10.82□□□□□ -0.68
P01798 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.82□□□□□ -0.68
P01798 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.82□□□□□ -0.68
P01798 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.82□□□□□ -0.68
P01798 Gm6013-201ENSMUST00000212264 699 ntBASIC10.82□□□□□ -0.68
P01798 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.82□□□□□ -0.68
P01798 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.82□□□□□ -0.68
P01798 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.82□□□□□ -0.68
P01798 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
P01798 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.82□□□□□ -0.68
P01798 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
P01798 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.82□□□□□ -0.68
P01798 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01798 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
P01798 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
P01798 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
P01798 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.81□□□□□ -0.68
P01798 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
P01798 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.81□□□□□ -0.68
P01798 Gm16202-201ENSMUST00000117532 544 ntBASIC10.81□□□□□ -0.68
P01798 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.81□□□□□ -0.68
P01798 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.81□□□□□ -0.68
P01798 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
P01798 Gm27514-201ENSMUST00000183692 110 ntBASIC10.81□□□□□ -0.68
P01798 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Gm37922-201ENSMUST00000195596 455 ntBASIC10.81□□□□□ -0.68
P01798 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.81□□□□□ -0.68
P01798 Gm6458-201ENSMUST00000211573 635 ntBASIC10.81□□□□□ -0.68
P01798 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.81□□□□□ -0.68
P01798 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.81□□□□□ -0.68
P01798 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.81□□□□□ -0.68
P01798 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
P01798 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
P01798 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.81□□□□□ -0.68
P01798 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.81□□□□□ -0.68
P01798 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
P01798 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.81□□□□□ -0.68
P01798 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.81□□□□□ -0.68
P01798 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
P01798 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01798 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
P01798 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms