Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Igh-VJ558P01758 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Gm13226-201ENSMUST00000117838 404 ntBASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Gm13315-201ENSMUST00000120376 991 ntBASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Gm8738-201ENSMUST00000172606 329 ntBASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Gm9022-201ENSMUST00000182482 992 ntBASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Gm27243-201ENSMUST00000183964 521 ntBASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Gm27390-201ENSMUST00000184516 176 ntBASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Gm27731-201ENSMUST00000185192 107 ntBASIC10.9□□□□□ -0.66
Igh-VJ558P01758 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Gm22058-201ENSMUST00000083393 310 ntBASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Igh-VJ558P01758 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Igh-VJ558P01758 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Igh-VJ558P01758 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Igh-VJ558P01758 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Igh-VJ558P01758 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Igh-VJ558P01758 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.9□□□□□ -0.67
Igh-VJ558P01758 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Igh-VJ558P01758 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Igh-VJ558P01758 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Gm45930-201ENSMUST00000221330 292 ntBASIC10.89□□□□□ -0.67
Igh-VJ558P01758 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms