Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Ifna1P01572 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
Ifna1P01572 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.65□□□□□ -0.7
Ifna1P01572 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Ifna1P01572 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ifna1P01572 Gm12291-201ENSMUST00000121627 311 ntBASIC10.65□□□□□ -0.7
Ifna1P01572 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.65□□□□□ -0.7
Ifna1P01572 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.65□□□□□ -0.7
Ifna1P01572 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ifna1P01572 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.65□□□□□ -0.7
Ifna1P01572 Gm44069-201ENSMUST00000204898 506 ntBASIC10.65□□□□□ -0.7
Ifna1P01572 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ifna1P01572 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.65□□□□□ -0.7
Ifna1P01572 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Ifna1P01572 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ifna1P01572 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Ifna1P01572 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.65□□□□□ -0.7
Ifna1P01572 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Ifna1P01572 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ifna1P01572 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Ifna1P01572 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.64□□□□□ -0.71
Ifna1P01572 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Ifna1P01572 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Ifna1P01572 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.64□□□□□ -0.71
Ifna1P01572 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.64□□□□□ -0.71
Ifna1P01572 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.64□□□□□ -0.71
Ifna1P01572 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Ifna1P01572 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.64□□□□□ -0.71
Ifna1P01572 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.64□□□□□ -0.71
Ifna1P01572 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.64□□□□□ -0.71
Ifna1P01572 Gm7730-201ENSMUST00000212486 454 ntBASIC10.64□□□□□ -0.71
Ifna1P01572 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Gm16372-201ENSMUST00000073088 450 ntBASIC10.64□□□□□ -0.71
Ifna1P01572 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.64□□□□□ -0.71
Ifna1P01572 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ifna1P01572 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.64□□□□□ -0.71
Ifna1P01572 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ifna1P01572 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ifna1P01572 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.63□□□□□ -0.71
Ifna1P01572 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ifna1P01572 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ifna1P01572 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ifna1P01572 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ifna1P01572 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Ifna1P01572 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ifna1P01572 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ifna1P01572 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ifna1P01572 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ifna1P01572 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.63□□□□□ -0.71
Ifna1P01572 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Ifna1P01572 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ifna1P01572 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Ifna1P01572 Gm24694-201ENSMUST00000180054 110 ntBASIC10.63□□□□□ -0.71
Ifna1P01572 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ifna1P01572 Mir7684-201ENSMUST00000183858 60 ntBASIC10.63□□□□□ -0.71
Ifna1P01572 Mir8102-201ENSMUST00000184148 139 ntBASIC10.63□□□□□ -0.71
Ifna1P01572 Gm27663-201ENSMUST00000184839 110 ntBASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms