Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1aO89116 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1aO89116 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1aO89116 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1aO89116 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1aO89116 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vti1aO89116 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Vti1aO89116 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Vti1aO89116 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Vti1aO89116 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.66□□□□□ -0.22
Vti1aO89116 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Vti1aO89116 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Vti1aO89116 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Vti1aO89116 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.65□□□□□ -0.22
Vti1aO89116 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.65□□□□□ -0.22
Vti1aO89116 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Vti1aO89116 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Vti1aO89116 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.65□□□□□ -0.22
Vti1aO89116 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.65□□□□□ -0.22
Vti1aO89116 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Vti1aO89116 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.65□□□□□ -0.22
Vti1aO89116 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.65□□□□□ -0.22
Vti1aO89116 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.65□□□□□ -0.22
Vti1aO89116 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vti1aO89116 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Vti1aO89116 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.64□□□□□ -0.23
Vti1aO89116 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Vti1aO89116 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Vti1aO89116 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.64□□□□□ -0.23
Vti1aO89116 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.64□□□□□ -0.23
Vti1aO89116 Gm24830-201ENSMUST00000102024 166 ntBASIC13.64□□□□□ -0.23
Vti1aO89116 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.64□□□□□ -0.23
Vti1aO89116 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.64□□□□□ -0.23
Vti1aO89116 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.64□□□□□ -0.23
Vti1aO89116 Gm25890-201ENSMUST00000177643 165 ntBASIC13.64□□□□□ -0.23
Vti1aO89116 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.64□□□□□ -0.23
Vti1aO89116 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.64□□□□□ -0.23
Vti1aO89116 Gm22614-201ENSMUST00000178300 165 ntBASIC13.64□□□□□ -0.23
Vti1aO89116 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.64□□□□□ -0.23
Vti1aO89116 Mir7070-201ENSMUST00000183657 86 ntBASIC13.64□□□□□ -0.23
Vti1aO89116 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Gm32025-201ENSMUST00000217960 307 ntBASIC13.64□□□□□ -0.23
Vti1aO89116 Gm22042-201ENSMUST00000082989 165 ntBASIC13.64□□□□□ -0.23
Vti1aO89116 Gm26232-201ENSMUST00000083360 166 ntBASIC13.64□□□□□ -0.23
Vti1aO89116 Gm24136-201ENSMUST00000083374 165 ntBASIC13.64□□□□□ -0.23
Vti1aO89116 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.64□□□□□ -0.23
Vti1aO89116 Gm26110-201ENSMUST00000083971 165 ntBASIC13.64□□□□□ -0.23
Vti1aO89116 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Vti1aO89116 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Vti1aO89116 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Vti1aO89116 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Vti1aO89116 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vti1aO89116 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms