Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Matn4O89029 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Matn4O89029 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Matn4O89029 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Matn4O89029 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Matn4O89029 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Matn4O89029 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Matn4O89029 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Matn4O89029 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Matn4O89029 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Matn4O89029 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Matn4O89029 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn4O89029 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.9□□□□□ -0.5
Matn4O89029 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn4O89029 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn4O89029 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn4O89029 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Matn4O89029 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Matn4O89029 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn4O89029 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.9□□□□□ -0.5
Matn4O89029 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn4O89029 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.9□□□□□ -0.5
Matn4O89029 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn4O89029 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Matn4O89029 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn4O89029 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.9□□□□□ -0.5
Matn4O89029 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.9□□□□□ -0.5
Matn4O89029 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.9□□□□□ -0.5
Matn4O89029 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.9□□□□□ -0.5
Matn4O89029 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.9□□□□□ -0.5
Matn4O89029 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Matn4O89029 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Matn4O89029 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Matn4O89029 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.9□□□□□ -0.5
Matn4O89029 Gm17208-201ENSMUST00000168388 535 ntBASIC11.9□□□□□ -0.5
Matn4O89029 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn4O89029 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.9□□□□□ -0.5
Matn4O89029 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.9□□□□□ -0.5
Matn4O89029 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.9□□□□□ -0.5
Matn4O89029 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.9□□□□□ -0.5
Matn4O89029 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Matn4O89029 Gm38671-201ENSMUST00000200573 130 ntBASIC11.9□□□□□ -0.5
Matn4O89029 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.9□□□□□ -0.5
Matn4O89029 Gm45668-201ENSMUST00000211271 493 ntBASIC11.9□□□□□ -0.5
Matn4O89029 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn4O89029 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn4O89029 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Matn4O89029 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn4O89029 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn4O89029 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.9□□□□□ -0.5
Matn4O89029 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Matn4O89029 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.9□□□□□ -0.5
Matn4O89029 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn4O89029 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Matn4O89029 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Matn4O89029 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Matn4O89029 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.9□□□□□ -0.51
Matn4O89029 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Matn4O89029 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Matn4O89029 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Matn4O89029 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.89□□□□□ -0.51
Matn4O89029 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Matn4O89029 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Matn4O89029 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Matn4O89029 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.89□□□□□ -0.51
Matn4O89029 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.89□□□□□ -0.51
Matn4O89029 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.89□□□□□ -0.51
Matn4O89029 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.89□□□□□ -0.51
Matn4O89029 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Matn4O89029 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.89□□□□□ -0.51
Matn4O89029 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.89□□□□□ -0.51
Matn4O89029 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.89□□□□□ -0.51
Matn4O89029 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.89□□□□□ -0.51
Matn4O89029 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Matn4O89029 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Matn4O89029 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms