Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.13□□□□□ -0.47
Hcn1O88704 Gm16177-201ENSMUST00000120728 718 ntBASIC12.13□□□□□ -0.47
Hcn1O88704 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.13□□□□□ -0.47
Hcn1O88704 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Hcn1O88704 Gm27731-201ENSMUST00000185192 107 ntBASIC12.13□□□□□ -0.47
Hcn1O88704 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.13□□□□□ -0.47
Hcn1O88704 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.13□□□□□ -0.47
Hcn1O88704 Gm43818-201ENSMUST00000200605 466 ntBASIC12.13□□□□□ -0.47
Hcn1O88704 Gm40466-201ENSMUST00000212174 422 ntBASIC12.13□□□□□ -0.47
Hcn1O88704 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.13□□□□□ -0.47
Hcn1O88704 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.13□□□□□ -0.47
Hcn1O88704 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hcn1O88704 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Hcn1O88704 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hcn1O88704 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.13□□□□□ -0.47
Hcn1O88704 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Hcn1O88704 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hcn1O88704 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Hcn1O88704 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Hcn1O88704 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.13□□□□□ -0.47
Hcn1O88704 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hcn1O88704 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Hcn1O88704 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.12□□□□□ -0.47
Hcn1O88704 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Hcn1O88704 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.12□□□□□ -0.47
Hcn1O88704 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.12□□□□□ -0.47
Hcn1O88704 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.12□□□□□ -0.47
Hcn1O88704 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.12□□□□□ -0.47
Hcn1O88704 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Hcn1O88704 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.12□□□□□ -0.47
Hcn1O88704 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hcn1O88704 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.12□□□□□ -0.47
Hcn1O88704 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.12□□□□□ -0.47
Hcn1O88704 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hcn1O88704 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.12□□□□□ -0.47
Hcn1O88704 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Hcn1O88704 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hcn1O88704 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.12□□□□□ -0.47
Hcn1O88704 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.12□□□□□ -0.47
Hcn1O88704 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hcn1O88704 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.11□□□□□ -0.47
Hcn1O88704 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Hcn1O88704 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hcn1O88704 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hcn1O88704 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hcn1O88704 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.11□□□□□ -0.47
Hcn1O88704 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hcn1O88704 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.11□□□□□ -0.47
Hcn1O88704 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hcn1O88704 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Hcn1O88704 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.11□□□□□ -0.47
Hcn1O88704 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hcn1O88704 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hcn1O88704 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hcn1O88704 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Hcn1O88704 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hcn1O88704 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms