Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubr1O70481 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubr1O70481 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ubr1O70481 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubr1O70481 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC16.07■□□□□ 0.16
Ubr1O70481 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC16.07■□□□□ 0.16
Ubr1O70481 Gm14460-201ENSMUST00000121511 639 ntBASIC16.07■□□□□ 0.16
Ubr1O70481 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubr1O70481 Gm3150-201ENSMUST00000166418 204 ntBASIC16.07■□□□□ 0.16
Ubr1O70481 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubr1O70481 Gm5714-201ENSMUST00000197343 566 ntBASIC16.07■□□□□ 0.16
Ubr1O70481 AC171241.1-201ENSMUST00000228144 1166 ntBASIC16.07■□□□□ 0.16
Ubr1O70481 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ubr1O70481 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubr1O70481 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ubr1O70481 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubr1O70481 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubr1O70481 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubr1O70481 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubr1O70481 AC169511.2-201ENSMUST00000226674 2063 ntBASIC16.07■□□□□ 0.16
Ubr1O70481 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ubr1O70481 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubr1O70481 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ubr1O70481 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 AC160405.1-201ENSMUST00000218207 1545 ntBASIC16.06■□□□□ 0.16
Ubr1O70481 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.06■□□□□ 0.16
Ubr1O70481 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Ubr1O70481 Gm8194-201ENSMUST00000159783 859 ntBASIC16.06■□□□□ 0.16
Ubr1O70481 Gm5706-201ENSMUST00000181525 993 ntBASIC16.06■□□□□ 0.16
Ubr1O70481 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC16.06■□□□□ 0.16
Ubr1O70481 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC16.06■□□□□ 0.16
Ubr1O70481 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Gm7600-201ENSMUST00000209657 785 ntBASIC16.06■□□□□ 0.16
Ubr1O70481 Gm45398-201ENSMUST00000210561 165 ntBASIC16.06■□□□□ 0.16
Ubr1O70481 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC16.06■□□□□ 0.16
Ubr1O70481 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 AC140293.1-201ENSMUST00000225626 1247 ntBASIC16.06■□□□□ 0.16
Ubr1O70481 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ubr1O70481 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ubr1O70481 AC173482.6-201ENSMUST00000225889 1741 ntBASIC16.06■□□□□ 0.16
Ubr1O70481 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.05■□□□□ 0.16
Ubr1O70481 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ubr1O70481 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC16.05■□□□□ 0.16
Ubr1O70481 Gm37513-201ENSMUST00000194830 2268 ntBASIC16.05■□□□□ 0.16
Ubr1O70481 Gm38378-201ENSMUST00000195153 2268 ntBASIC16.05■□□□□ 0.16
Ubr1O70481 n-R5s64-201ENSMUST00000102019 119 ntBASIC16.05■□□□□ 0.16
Ubr1O70481 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC16.05■□□□□ 0.16
Ubr1O70481 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC16.05■□□□□ 0.16
Ubr1O70481 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC16.05■□□□□ 0.16
Ubr1O70481 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC16.05■□□□□ 0.16
Ubr1O70481 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC16.05■□□□□ 0.16
Ubr1O70481 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ubr1O70481 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC16.05■□□□□ 0.16
Ubr1O70481 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ubr1O70481 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC16.05■□□□□ 0.16
Ubr1O70481 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ubr1O70481 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Ubr1O70481 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ubr1O70481 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Ubr1O70481 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ubr1O70481 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC16.05■□□□□ 0.16
Ubr1O70481 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms