Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.73□□□□□ -0.37
Chrna4O70174 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Chrna4O70174 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Chrna4O70174 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Chrna4O70174 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.73□□□□□ -0.37
Chrna4O70174 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Chrna4O70174 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.73□□□□□ -0.37
Chrna4O70174 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.73□□□□□ -0.37
Chrna4O70174 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Snora78-201ENSMUST00000158630 128 ntBASIC12.73□□□□□ -0.37
Chrna4O70174 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Mir7085-201ENSMUST00000184353 66 ntBASIC12.73□□□□□ -0.37
Chrna4O70174 Gm37008-201ENSMUST00000195712 319 ntBASIC12.73□□□□□ -0.37
Chrna4O70174 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.73□□□□□ -0.37
Chrna4O70174 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.73□□□□□ -0.37
Chrna4O70174 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.73□□□□□ -0.37
Chrna4O70174 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Gm22058-201ENSMUST00000083393 310 ntBASIC12.73□□□□□ -0.37
Chrna4O70174 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.73□□□□□ -0.37
Chrna4O70174 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Chrna4O70174 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Chrna4O70174 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Chrna4O70174 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Chrna4O70174 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chrna4O70174 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Chrna4O70174 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.72□□□□□ -0.37
Chrna4O70174 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Chrna4O70174 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.72□□□□□ -0.37
Chrna4O70174 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Chrna4O70174 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Chrna4O70174 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.72□□□□□ -0.37
Chrna4O70174 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.72□□□□□ -0.37
Chrna4O70174 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Gm16379-201ENSMUST00000161469 348 ntBASIC12.72□□□□□ -0.37
Chrna4O70174 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Chrna4O70174 Gm8762-201ENSMUST00000193486 339 ntBASIC12.72□□□□□ -0.37
Chrna4O70174 Gm18062-201ENSMUST00000208020 547 ntBASIC12.72□□□□□ -0.37
Chrna4O70174 Gm18055-201ENSMUST00000208254 547 ntBASIC12.72□□□□□ -0.37
Chrna4O70174 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.72□□□□□ -0.37
Chrna4O70174 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.72□□□□□ -0.37
Chrna4O70174 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.72□□□□□ -0.37
Chrna4O70174 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.72□□□□□ -0.37
Chrna4O70174 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Chrna4O70174 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Chrna4O70174 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Chrna4O70174 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.72□□□□□ -0.37
Chrna4O70174 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms