Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.49□□□□□ -0.57
Matn3O35701 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 Gm5161-201ENSMUST00000075243 853 ntBASIC11.49□□□□□ -0.57
Matn3O35701 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Matn3O35701 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Matn3O35701 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Matn3O35701 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.49□□□□□ -0.57
Matn3O35701 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Matn3O35701 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.48□□□□□ -0.57
Matn3O35701 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.48□□□□□ -0.57
Matn3O35701 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Matn3O35701 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.48□□□□□ -0.57
Matn3O35701 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.48□□□□□ -0.57
Matn3O35701 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Matn3O35701 Gm5745-201ENSMUST00000183748 313 ntBASIC11.48□□□□□ -0.57
Matn3O35701 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.48□□□□□ -0.57
Matn3O35701 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.48□□□□□ -0.57
Matn3O35701 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.48□□□□□ -0.57
Matn3O35701 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.48□□□□□ -0.57
Matn3O35701 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Matn3O35701 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.48□□□□□ -0.57
Matn3O35701 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Matn3O35701 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Matn3O35701 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Matn3O35701 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Matn3O35701 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.47□□□□□ -0.57
Matn3O35701 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.47□□□□□ -0.57
Matn3O35701 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Matn3O35701 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Matn3O35701 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.47□□□□□ -0.57
Matn3O35701 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.47□□□□□ -0.57
Matn3O35701 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.47□□□□□ -0.57
Matn3O35701 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Gm13813-201ENSMUST00000120998 787 ntBASIC11.47□□□□□ -0.57
Matn3O35701 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Matn3O35701 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Matn3O35701 Gm27680-201ENSMUST00000184192 160 ntBASIC11.47□□□□□ -0.57
Matn3O35701 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.47□□□□□ -0.57
Matn3O35701 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms