Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Alx4O35137 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.27□□□□□ -0.6
Alx4O35137 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.27□□□□□ -0.6
Alx4O35137 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Alx4O35137 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Alx4O35137 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Alx4O35137 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Alx4O35137 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Alx4O35137 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Alx4O35137 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Alx4O35137 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.27□□□□□ -0.61
Alx4O35137 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Alx4O35137 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.27□□□□□ -0.61
Alx4O35137 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Alx4O35137 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Alx4O35137 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Alx4O35137 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Alx4O35137 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Alx4O35137 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Alx4O35137 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Alx4O35137 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.26□□□□□ -0.61
Alx4O35137 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.26□□□□□ -0.61
Alx4O35137 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.26□□□□□ -0.61
Alx4O35137 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.26□□□□□ -0.61
Alx4O35137 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.26□□□□□ -0.61
Alx4O35137 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.26□□□□□ -0.61
Alx4O35137 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Alx4O35137 Gm22121-201ENSMUST00000175148 54 ntBASIC11.26□□□□□ -0.61
Alx4O35137 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.26□□□□□ -0.61
Alx4O35137 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.26□□□□□ -0.61
Alx4O35137 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.26□□□□□ -0.61
Alx4O35137 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.26□□□□□ -0.61
Alx4O35137 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.26□□□□□ -0.61
Alx4O35137 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Alx4O35137 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.26□□□□□ -0.61
Alx4O35137 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Alx4O35137 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Alx4O35137 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.26□□□□□ -0.61
Alx4O35137 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Alx4O35137 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.26□□□□□ -0.61
Alx4O35137 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Alx4O35137 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.25□□□□□ -0.61
Alx4O35137 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Alx4O35137 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.25□□□□□ -0.61
Alx4O35137 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.25□□□□□ -0.61
Alx4O35137 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Alx4O35137 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms