Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Polr1aO35134 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Polr1aO35134 Gm13916-201ENSMUST00000117368 628 ntBASIC19.06■□□□□ 0.64
Polr1aO35134 Gm16071-201ENSMUST00000119589 793 ntBASIC19.06■□□□□ 0.64
Polr1aO35134 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC19.06■□□□□ 0.64
Polr1aO35134 Gm17826-201ENSMUST00000189720 798 ntBASIC19.06■□□□□ 0.64
Polr1aO35134 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC19.06■□□□□ 0.64
Polr1aO35134 Gm6867-201ENSMUST00000219165 425 ntBASIC19.06■□□□□ 0.64
Polr1aO35134 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Polr1aO35134 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC19.06■□□□□ 0.64
Polr1aO35134 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Polr1aO35134 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Polr1aO35134 AC173482.6-201ENSMUST00000225889 1741 ntBASIC19.06■□□□□ 0.64
Polr1aO35134 Zkscan3-207ENSMUST00000223831 2101 ntBASIC19.06■□□□□ 0.64
Polr1aO35134 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Polr1aO35134 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Polr1aO35134 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Polr1aO35134 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Polr1aO35134 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC19.06■□□□□ 0.64
Polr1aO35134 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Polr1aO35134 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Polr1aO35134 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Polr1aO35134 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Polr1aO35134 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Polr1aO35134 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Polr1aO35134 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Polr1aO35134 Gm15004-201ENSMUST00000119192 630 ntBASIC19.05■□□□□ 0.64
Polr1aO35134 Gm15207-201ENSMUST00000119259 442 ntBASIC19.05■□□□□ 0.64
Polr1aO35134 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC19.05■□□□□ 0.64
Polr1aO35134 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Polr1aO35134 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Polr1aO35134 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Polr1aO35134 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC19.05■□□□□ 0.64
Polr1aO35134 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Polr1aO35134 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Polr1aO35134 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC19.05■□□□□ 0.64
Polr1aO35134 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Polr1aO35134 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Polr1aO35134 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Polr1aO35134 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Polr1aO35134 Gm22920-201ENSMUST00000102175 109 ntBASIC19.05■□□□□ 0.64
Polr1aO35134 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Polr1aO35134 Gm4993-201ENSMUST00000118719 1174 ntBASIC19.05■□□□□ 0.64
Polr1aO35134 Gm11660-201ENSMUST00000120955 412 ntBASIC19.05■□□□□ 0.64
Polr1aO35134 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Polr1aO35134 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC19.05■□□□□ 0.64
Polr1aO35134 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Polr1aO35134 Gm38151-201ENSMUST00000195085 289 ntBASIC19.05■□□□□ 0.64
Polr1aO35134 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC19.05■□□□□ 0.64
Polr1aO35134 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Polr1aO35134 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Polr1aO35134 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Polr1aO35134 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Polr1aO35134 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Polr1aO35134 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Polr1aO35134 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Polr1aO35134 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr1aO35134 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr1aO35134 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr1aO35134 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr1aO35134 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC19.04■□□□□ 0.64
Polr1aO35134 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr1aO35134 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Polr1aO35134 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Polr1aO35134 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr1aO35134 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr1aO35134 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr1aO35134 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr1aO35134 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr1aO35134 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC19.04■□□□□ 0.64
Polr1aO35134 Gm18159-201ENSMUST00000174516 1070 ntBASIC19.04■□□□□ 0.64
Polr1aO35134 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr1aO35134 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Polr1aO35134 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Polr1aO35134 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Polr1aO35134 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
Polr1aO35134 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Polr1aO35134 AC126262.1-201ENSMUST00000221802 1904 ntBASIC19.04■□□□□ 0.64
Polr1aO35134 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr1aO35134 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr1aO35134 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr1aO35134 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr1aO35134 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC19.04■□□□□ 0.64
Polr1aO35134 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Polr1aO35134 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Polr1aO35134 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Polr1aO35134 Gm43807-201ENSMUST00000200678 1781 ntBASIC19.03■□□□□ 0.64
Polr1aO35134 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Polr1aO35134 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Polr1aO35134 Gm15725-201ENSMUST00000119947 1090 ntBASIC19.03■□□□□ 0.64
Polr1aO35134 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Polr1aO35134 Mir1956-201ENSMUST00000157748 65 ntBASIC19.03■□□□□ 0.64
Polr1aO35134 Gm18893-201ENSMUST00000198416 943 ntBASIC19.03■□□□□ 0.64
Polr1aO35134 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC19.03■□□□□ 0.64
Polr1aO35134 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC19.03■□□□□ 0.64
Polr1aO35134 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC19.03■□□□□ 0.64
Polr1aO35134 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Polr1aO35134 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Polr1aO35134 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Polr1aO35134 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms