Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.84□□□□□ -0.67
Casp6O08738 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Casp6O08738 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casp6O08738 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casp6O08738 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Casp6O08738 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.83□□□□□ -0.68
Casp6O08738 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Casp6O08738 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.83□□□□□ -0.68
Casp6O08738 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Casp6O08738 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Casp6O08738 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.83□□□□□ -0.68
Casp6O08738 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Casp6O08738 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.83□□□□□ -0.68
Casp6O08738 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Casp6O08738 Gm12616-201ENSMUST00000118594 382 ntBASIC10.83□□□□□ -0.68
Casp6O08738 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.83□□□□□ -0.68
Casp6O08738 Gm9083-201ENSMUST00000120423 819 ntBASIC10.83□□□□□ -0.68
Casp6O08738 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.83□□□□□ -0.68
Casp6O08738 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Casp6O08738 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.83□□□□□ -0.68
Casp6O08738 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Gm12624-201ENSMUST00000177615 382 ntBASIC10.83□□□□□ -0.68
Casp6O08738 Gm12621-201ENSMUST00000177760 382 ntBASIC10.83□□□□□ -0.68
Casp6O08738 Gm12615-201ENSMUST00000177970 382 ntBASIC10.83□□□□□ -0.68
Casp6O08738 Gm12622-201ENSMUST00000177975 382 ntBASIC10.83□□□□□ -0.68
Casp6O08738 Gm12627-201ENSMUST00000178412 382 ntBASIC10.83□□□□□ -0.68
Casp6O08738 Gm12625-201ENSMUST00000179122 382 ntBASIC10.83□□□□□ -0.68
Casp6O08738 Gm12614-201ENSMUST00000179586 382 ntBASIC10.83□□□□□ -0.68
Casp6O08738 Gm12613-201ENSMUST00000180323 382 ntBASIC10.83□□□□□ -0.68
Casp6O08738 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.83□□□□□ -0.68
Casp6O08738 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Casp6O08738 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Casp6O08738 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.83□□□□□ -0.68
Casp6O08738 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC10.83□□□□□ -0.68
Casp6O08738 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Rubie-203ENSMUST00000227803 2430 ntBASIC10.83□□□□□ -0.68
Casp6O08738 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Casp6O08738 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.82□□□□□ -0.68
Casp6O08738 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Casp6O08738 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Casp6O08738 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Casp6O08738 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Casp6O08738 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Casp6O08738 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Casp6O08738 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Casp6O08738 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Casp6O08738 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Casp6O08738 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Casp6O08738 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Casp6O08738 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Casp6O08738 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Casp6O08738 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Casp6O08738 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Casp6O08738 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Casp6O08738 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Casp6O08738 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Casp6O08738 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.82□□□□□ -0.68
Casp6O08738 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Casp6O08738 Gm14208-201ENSMUST00000119645 678 ntBASIC10.82□□□□□ -0.68
Casp6O08738 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Casp6O08738 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Casp6O08738 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC10.82□□□□□ -0.68
Casp6O08738 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Casp6O08738 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.82□□□□□ -0.68
Casp6O08738 Gm27627-201ENSMUST00000183644 150 ntBASIC10.82□□□□□ -0.68
Casp6O08738 Gm28882-201ENSMUST00000185504 314 ntBASIC10.82□□□□□ -0.68
Casp6O08738 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Casp6O08738 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.82□□□□□ -0.68
Casp6O08738 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.82□□□□□ -0.68
Casp6O08738 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Casp6O08738 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Casp6O08738 Gm10076-201ENSMUST00000073238 384 ntBASIC10.82□□□□□ -0.68
Casp6O08738 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Casp6O08738 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.82□□□□□ -0.68
Casp6O08738 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Casp6O08738 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Casp6O08738 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms