Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
B020004C17RikJ3QP07 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Gm14314-201ENSMUST00000118225 1015 ntBASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Gm13888-201ENSMUST00000119148 422 ntBASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Gm2965-201ENSMUST00000198365 343 ntBASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
B020004C17RikJ3QP07 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Mir6546-201ENSMUST00000184460 62 ntBASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Gm10774-201ENSMUST00000188689 204 ntBASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
B020004C17RikJ3QP07 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
B020004C17RikJ3QP07 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
B020004C17RikJ3QP07 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
B020004C17RikJ3QP07 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
B020004C17RikJ3QP07 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
B020004C17RikJ3QP07 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
B020004C17RikJ3QP07 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
B020004C17RikJ3QP07 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.03□□□□□ -0.16
B020004C17RikJ3QP07 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
B020004C17RikJ3QP07 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
B020004C17RikJ3QP07 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
B020004C17RikJ3QP07 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
B020004C17RikJ3QP07 Gm26286-201ENSMUST00000104166 134 ntBASIC14.03□□□□□ -0.16
B020004C17RikJ3QP07 Gm12857-201ENSMUST00000117678 592 ntBASIC14.03□□□□□ -0.16
B020004C17RikJ3QP07 Gm11511-201ENSMUST00000118146 540 ntBASIC14.03□□□□□ -0.16
B020004C17RikJ3QP07 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms