Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim55G3X8Y1 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim55G3X8Y1 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Gm14701-201ENSMUST00000117156 348 ntBASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Gm13823-201ENSMUST00000119930 345 ntBASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.95□□□□□ -0.34
Trim55G3X8Y1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Gm8396-201ENSMUST00000057361 823 ntBASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.95□□□□□ -0.34
Trim55G3X8Y1 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim55G3X8Y1 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Mir1895-201ENSMUST00000122615 79 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm29310-201ENSMUST00000185468 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm21825-201ENSMUST00000185728 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm29109-201ENSMUST00000185895 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm21896-201ENSMUST00000186520 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm21873-201ENSMUST00000186728 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm21794-201ENSMUST00000187056 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm21880-201ENSMUST00000187275 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm21826-201ENSMUST00000187451 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm21198-201ENSMUST00000188393 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm21749-201ENSMUST00000189343 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm21901-201ENSMUST00000189568 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm29424-201ENSMUST00000189716 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm28599-201ENSMUST00000189838 694 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm21867-201ENSMUST00000189917 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm29269-201ENSMUST00000190087 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm21722-201ENSMUST00000190153 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm28423-201ENSMUST00000190701 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm21899-201ENSMUST00000190745 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm21910-201ENSMUST00000191163 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm21849-201ENSMUST00000191571 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm28678-201ENSMUST00000191593 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm20910-201ENSMUST00000193268 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gm21871-201ENSMUST00000194621 696 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim55G3X8Y1 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms