Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NpcdF8VQB8 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NpcdF8VQB8 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NpcdF8VQB8 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Gm14999-201ENSMUST00000121039 624 ntBASIC15.19■□□□□ 0.02
NpcdF8VQB8 Rmrp-201ENSMUST00000157463 271 ntBASIC15.19■□□□□ 0.02
NpcdF8VQB8 Gm28882-201ENSMUST00000185504 314 ntBASIC15.19■□□□□ 0.02
NpcdF8VQB8 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC15.19■□□□□ 0.02
NpcdF8VQB8 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.19■□□□□ 0.02
NpcdF8VQB8 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NpcdF8VQB8 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC15.18■□□□□ 0.02
NpcdF8VQB8 Gm14314-201ENSMUST00000118225 1015 ntBASIC15.18■□□□□ 0.02
NpcdF8VQB8 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.18■□□□□ 0.02
NpcdF8VQB8 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Gm19287-201ENSMUST00000203190 358 ntBASIC15.18■□□□□ 0.02
NpcdF8VQB8 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
NpcdF8VQB8 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Gm21811-201ENSMUST00000096485 930 ntBASIC15.18■□□□□ 0.02
NpcdF8VQB8 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NpcdF8VQB8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.17■□□□□ 0.02
NpcdF8VQB8 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.17■□□□□ 0.02
NpcdF8VQB8 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.17■□□□□ 0.02
NpcdF8VQB8 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.17■□□□□ 0.02
NpcdF8VQB8 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Mir1901-201ENSMUST00000122616 78 ntBASIC15.17■□□□□ 0.02
NpcdF8VQB8 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Gm37444-201ENSMUST00000193605 439 ntBASIC15.17■□□□□ 0.02
NpcdF8VQB8 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Gm1821-202ENSMUST00000227415 750 ntBASIC15.17■□□□□ 0.02
NpcdF8VQB8 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Gm10076-201ENSMUST00000073238 384 ntBASIC15.17■□□□□ 0.02
NpcdF8VQB8 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NpcdF8VQB8 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms