Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh9F8VPK8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Gm8652-201ENSMUST00000181363 964 ntBASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Gm27486-201ENSMUST00000184923 80 ntBASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Gm5035-201ENSMUST00000215581 927 ntBASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Gm10012-201ENSMUST00000078252 192 ntBASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh9F8VPK8 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Gm11814-201ENSMUST00000119515 929 ntBASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Gm10146-201ENSMUST00000072739 309 ntBASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms