Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pcdh1F7BJK1 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Gm7488-201ENSMUST00000117148 684 ntBASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Gm18307-201ENSMUST00000206864 949 ntBASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Map1b-203ENSMUST00000223725 2669 ntBASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh1F7BJK1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Mir7654-201ENSMUST00000185082 70 ntBASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Gm18473-201ENSMUST00000220543 868 ntBASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Gm16372-201ENSMUST00000073088 450 ntBASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms