Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syngap1F6SEU4 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Syngap1F6SEU4 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Syngap1F6SEU4 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syngap1F6SEU4 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Syngap1F6SEU4 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syngap1F6SEU4 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syngap1F6SEU4 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syngap1F6SEU4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syngap1F6SEU4 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Syngap1F6SEU4 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syngap1F6SEU4 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syngap1F6SEU4 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Syngap1F6SEU4 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Syngap1F6SEU4 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Syngap1F6SEU4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syngap1F6SEU4 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Gm13996-201ENSMUST00000118456 430 ntBASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Gm12948-201ENSMUST00000119406 682 ntBASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Gm27046-201ENSMUST00000182160 463 ntBASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.21□□□□□ -0.13
Syngap1F6SEU4 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Syngap1F6SEU4 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Syngap1F6SEU4 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Syngap1F6SEU4 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Syngap1F6SEU4 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Syngap1F6SEU4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Syngap1F6SEU4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Syngap1F6SEU4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Syngap1F6SEU4 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Syngap1F6SEU4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 AC140375.1-201ENSMUST00000225421 694 ntBASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.2□□□□□ -0.14
Syngap1F6SEU4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms