Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC15.13■□□□□ 0.01
Ube4aE9Q735 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC15.13■□□□□ 0.01
Ube4aE9Q735 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Gm42997-202ENSMUST00000200321 985 ntBASIC15.13■□□□□ 0.01
Ube4aE9Q735 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Gm18041-201ENSMUST00000218210 618 ntBASIC15.13■□□□□ 0.01
Ube4aE9Q735 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.13■□□□□ 0.01
Ube4aE9Q735 Grk6-205ENSMUST00000224653 2976 ntBASIC15.13■□□□□ 0.01
Ube4aE9Q735 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ube4aE9Q735 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Gm11989-201ENSMUST00000117240 672 ntBASIC15.12■□□□□ 0.01
Ube4aE9Q735 Gm11362-201ENSMUST00000118838 850 ntBASIC15.12■□□□□ 0.01
Ube4aE9Q735 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Gm21027-201ENSMUST00000219300 1236 ntBASIC15.12■□□□□ 0.01
Ube4aE9Q735 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ube4aE9Q735 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.11■□□□□ 0.01
Ube4aE9Q735 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ube4aE9Q735 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC15.11■□□□□ 0.01
Ube4aE9Q735 Gm15711-201ENSMUST00000118889 535 ntBASIC15.11■□□□□ 0.01
Ube4aE9Q735 Gm11331-201ENSMUST00000119764 288 ntBASIC15.11■□□□□ 0.01
Ube4aE9Q735 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Gm18734-201ENSMUST00000172937 808 ntBASIC15.11■□□□□ 0.01
Ube4aE9Q735 Gm7848-201ENSMUST00000210739 718 ntBASIC15.11■□□□□ 0.01
Ube4aE9Q735 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC15.11■□□□□ 0.01
Ube4aE9Q735 AC131330.1-201ENSMUST00000227814 1015 ntBASIC15.11■□□□□ 0.01
Ube4aE9Q735 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ube4aE9Q735 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ube4aE9Q735 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.1■□□□□ 0.01
Ube4aE9Q735 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC15.1■□□□□ 0.01
Ube4aE9Q735 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms