Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Gm14585-201ENSMUST00000120713 634 ntBASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Gm8737-201ENSMUST00000122208 642 ntBASIC12.73□□□□□ -0.37
Col4a6B1AVK5 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Gm25072-201ENSMUST00000175233 235 ntBASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Gm37028-201ENSMUST00000194276 107 ntBASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Gm38151-201ENSMUST00000195085 289 ntBASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Gm42518-201ENSMUST00000196277 938 ntBASIC12.73□□□□□ -0.37
Col4a6B1AVK5 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.73□□□□□ -0.37
Col4a6B1AVK5 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a6B1AVK5 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Gm13916-201ENSMUST00000117368 628 ntBASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.72□□□□□ -0.37
Col4a6B1AVK5 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Gm29499-201ENSMUST00000189151 486 ntBASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Gm28329-201ENSMUST00000191208 689 ntBASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Gm29171-201ENSMUST00000191397 486 ntBASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Gm44882-201ENSMUST00000205702 802 ntBASIC12.72□□□□□ -0.37
Col4a6B1AVK5 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a6B1AVK5 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Gm15004-201ENSMUST00000119192 630 ntBASIC12.71□□□□□ -0.37
Col4a6B1AVK5 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms